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Protein Alignment unpg and shox2
DIOPT Version :9
| Sequence 1: | NP_477146.1 |
Gene: | unpg / 35942 |
FlyBaseID: | FBgn0015561 |
Length: | 485 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001093694.1 |
Gene: | shox2 / 100101703 |
XenbaseID: | XB-GENE-480993 |
Length: | 311 |
Species: | Xenopus tropicalis |
| Alignment Length: | 175 |
Identity: | 52/175 - (29%) |
| Similarity: | 67/175 - (38%) |
Gaps: | 47/175 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 286 EDCSDDEGAQSRHEGGGMGGKDSQGNGSS------------------------------------ 314
|...:|..|.:|..|||.||....|...|
Frog 43 EGAREDGLAGNRCIGGGGGGGGGGGGARSPVLELDLSVERIRESGSPKLTEVSPEIKERKEELKQ 107
Fly 315 --------SNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRR 371
:..|.||.||.||.|||.||||.|....|.....|.:::..|.|||.:|::||||||
Frog 108 QALEEEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR 172
Fly 372 AKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQ 416
||.::.:..|....|...|:......|.| :||..|:|...||
Frog 173 AKCRKQENQLHKGVLIGAGSQFEACRVAP---YVNVGALRMPFQQ 214
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| unpg | NP_477146.1 |
Homeobox |
324..375 |
CDD:278475 |
26/50 (52%) |
| shox2 | NP_001093694.1 |
Homeobox |
123..177 |
CDD:365835 |
27/53 (51%) |
| OAR |
292..307 |
CDD:367680 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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