DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxb2

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_012808332.1 Gene:hoxb2 / 100038155 XenbaseID:XB-GENE-478525 Length:340 Species:Xenopus tropicalis


Alignment Length:258 Identity:65/258 - (25%)
Similarity:84/258 - (32%) Gaps:110/258 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 LPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPG- 212
            :|.|.:......||.:                       ...:..:.|..|..|.:.:.|..|| 
 Frog    43 IPPPFEQTIPSLNPGS-----------------------DSQIRPKSQKRAENGLLQQPQVQPGH 84

  Fly   213 ------------MAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSP 265
                        .|:......|||...|.:|...||.||.   |:                    
 Frog    85 LATEFPWMKEKKSAKKSSQGSPQALIPPPESAGGSPAEPP---GL-------------------- 126

  Fly   266 RNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQ 330
                                            |:.||               .|||.|||:|:.|
 Frog   127 --------------------------------HDAGG---------------GSRRLRTAYTNTQ 144

  Fly   331 LLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTS 393
            |||||:|||..|||....|.:||..|.|:|.|||:||||||.|.||    .|.|...::|..|
 Frog   145 LLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR----QTQHKDSQDGEHS 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 31/51 (61%)
hoxb2XP_012808332.1 Homeodomain 134..190 CDD:459649 34/55 (62%)

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