DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and not

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001164669.1 Gene:not / 100038059 XenbaseID:XB-GENE-478518 Length:236 Species:Xenopus tropicalis


Alignment Length:293 Identity:69/293 - (23%)
Similarity:100/293 - (34%) Gaps:124/293 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LPSSPAGH-------PAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGV 167
            ||.:|...       ..|.:|..:...:.|...||:       ||::|:......:|:.|... :
 Frog    26 LPRTPKASFNIDSILSRADRPVPKVSMEMPSWQPPS-------PPSVPYRYSYGMMPYPPVWL-I 82

  Fly   168 APTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSG 232
            .|| :.|                                    |.|||.|....|:.        
 Frog    83 KPT-VGY------------------------------------PSMAQQQPMRMPRG-------- 102

  Fly   233 SHSPMEPALDVGMDEDFECSGDSCSDISLTMS--PRNYNGEMD--KSRNGAYTNSDSEDCSDDEG 293
                           :..|...:|.:..|..|  |   ||.|:  ..|.|        .|     
 Frog   103 ---------------ECPCPDPACKERGLLYSHCP---NGSMNPLSWRTG--------PC----- 136

  Fly   294 AQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKL 358
                                    |.:|.||.||.|||..||:||..::|:..|||..:|::|.|
 Frog   137 ------------------------KMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNL 177

  Fly   359 SEVQVKIWFQNRRAKWKR-----VKAGLTSHGL 386
            :|.|||:||||||.||::     .||.|:..|:
 Frog   178 TETQVKVWFQNRRIKWRKQSLEQKKAKLSQFGV 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 28/50 (56%)
notNP_001164669.1 Homeobox 142..194 CDD:278475 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.