DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8026 and PMP34

DIOPT Version :10

Sequence 1:NP_724769.2 Gene:CG8026 / 35941 FlyBaseID:FBgn0033391 Length:322 Species:Drosophila melanogaster
Sequence 2:XP_308358.4 Gene:PMP34 / 1269711 VectorBaseID:AGAMI1_003049 Length:324 Species:Anopheles gambiae


Alignment Length:314 Identity:90/314 - (28%)
Similarity:157/314 - (50%) Gaps:37/314 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VFAHVKYEHLVAGVSGGVVSTLILHPLDLIKIRFAVND-GRTATVPQYRGLSSAFTTIFRQEGFR 80
            ||::..:.|.|:|.:|.|::....:|||.::.|..:.: .|...:..:|.|.|    :..:|||.
Mosquito     9 VFSYQSWVHAVSGSAGSVIAMSAFYPLDTVRSRLQLEEPERRKALSTWRVLRS----LIDEEGFE 69

  Fly    81 GLYKGVTPNVWGSGSSWGLYFMFYNTIKTFIQGGNTTMPLGPTMNMLAAAESGILTLLLTNPIWV 145
            .||:|:.|.:.....|..:||..::::|. ::||.....||   ::|..:.:|::.:|.|.|.||
Mosquito    70 TLYRGLVPVLESLCISNFVYFYTFHSLKA-LRGGGGQSALG---DLLLGSLAGVVNVLTTTPCWV 130

  Fly   146 VKTRLCLQ-------------CDAASSAEYRGMIHALGQIYKEEGIRGLYRGFVPGMLGVSHGAI 197
            |.|||.::             ....|..:|.|::..|..|.:.||:|||:.|.||.::.|.:.||
Mosquito   131 VNTRLKMKGLGQQHGKRANGPVAPGSDVQYDGLLDGLQYIARTEGVRGLWAGAVPSLMLVINPAI 195

  Fly   198 QFMTYEELK---NAYNEYRKLPIDTKLATTEYLAFAAVSKLIAAAATYPYQVVRARLQ----DHH 255
            |||.||.||   .|....:..|     :...:.:..||:|:||...|||.|:|:.:|:    |..
Mosquito   196 QFMVYESLKRRLTAAGNAKSSP-----SAITFFSIGAVAKMIATVLTYPLQLVQTKLRHGNTDRS 255

  Fly   256 HRYNGTWDCIKQ---TWRFEGYRGFYKGLKASLTRVVPACMVTFLVYENVSHFL 306
            .......|.::.   ..:.:|..|.::||:|.|.:.|....:.|:.||.::.|:
Mosquito   256 LNLPPNVDTVQMLLIILKRQGVAGLFRGLEAKLLQTVLTAALMFMAYEKIARFV 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8026NP_724769.2 Mito_carr 23..115 CDD:395101 25/92 (27%)
Mito_carr 119..213 CDD:395101 37/109 (34%)
Mito_carr 220..307 CDD:395101 24/94 (26%)
PMP34XP_308358.4 Mito_carr 15..99 CDD:395101 24/88 (27%)
Mito_carr 106..208 CDD:395101 36/104 (35%)
Mito_carr 223..310 CDD:395101 24/87 (28%)

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