DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and ARA6

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_567008.1 Gene:ARA6 / 824649 AraportID:AT3G54840 Length:202 Species:Arabidopsis thaliana


Alignment Length:227 Identity:65/227 - (28%)
Similarity:106/227 - (46%) Gaps:41/227 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 ASEYSNQDSGSEDDSEEQADTTEPENAKPMPAFGDLTMDQEMEPAIMTSTSDKREHLYKILVIGE 491
            ||...:::||:      .:..:..|||.|                     :|.:....|::::|:
plant     4 ASSLPDRNSGT------LSGLSNSENAVP---------------------ADAKNLRVKLVLLGD 41

  Fly   492 LGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQERFGNMTRVYYKE 556
            .|.||:..:.|:|...|....:.|:|..|..:.:....:|.|:.::||.|||||:..:..:||:.
plant    42 SGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRG 106

  Fly   557 AVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSP-IPCILLANKCD-QEKQGIITQPEKMDE 619
            |..|.||:|:|...:|.....|.::|..     .||| |...|:.||.| .||:.:.|  |...|
plant   107 AGVAVIVYDITSPESFKKAQYWVKELQK-----HGSPDIVMALVGNKADLHEKREVPT--EDGME 164

  Fly   620 YVRENGFAGWFETSAK--ENIN--IDEAARAL 647
            ...:||.. :.|||||  :|||  .:|..:.|
plant   165 LAEKNGMF-FIETSAKTADNINQLFEEIGKRL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 56/170 (33%)
RAB 484..652 CDD:197555 56/170 (33%)
ARA6NP_567008.1 Rab5_related 33..196 CDD:206653 56/171 (33%)
Ras 35..197 CDD:278499 56/169 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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