DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab23

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001018579.1 Gene:rab23 / 553778 ZFINID:ZDB-GENE-050522-328 Length:237 Species:Danio rerio


Alignment Length:230 Identity:75/230 - (32%)
Similarity:115/230 - (50%) Gaps:33/230 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 MDQEMEPAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWD 528
            ::::||.||            |::|:|....||:|.|:||....|:::|:.||||||..:.:..:
Zfish     2 LEEDMEVAI------------KVVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIIVN 54

  Fly   529 ANTIVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSP 593
            ... |||.|||.||||.|..:|:.||:.|....:||..|...:|:.:|.|||    ||::..|. 
Zfish    55 GED-VRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWKE----KVEMEVGD- 113

  Fly   594 IPCILLANKCDQEKQGIITQPEKMDEYVRENGFA-----GWFETSAKENINIDEAARALVNKILI 653
            ||.:|:.||.|.....:|...|       ..|.|     .::.||.||::|::|..:.|.:|.|.
Zfish   114 IPTVLVQNKIDLLDDTVIKNEE-------AEGLAKRLKLRFYRTSVKEDLNVNEVFKYLADKYLQ 171

  Fly   654 NDKLISA---DLADGDKFNLSAADATGSDAKNKCS 685
            ..|..||   |:.......:...:.|||...|:.|
Zfish   172 RLKQQSAEETDIIHTSSNKIGVFNTTGSGHPNQNS 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 4/16 (25%)
Rab32_Rab38 484..686 CDD:206692 71/210 (34%)
rab23NP_001018579.1 Rab23_like 22..169 CDD:133306 56/159 (35%)

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