DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab1a

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001004787.1 Gene:rab1a / 448007 XenbaseID:XB-GENE-485527 Length:204 Species:Xenopus tropicalis


Alignment Length:217 Identity:65/217 - (29%)
Similarity:115/217 - (52%) Gaps:19/217 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 MTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 537
            |:|.:.:.::|:|:|:||:.|.||:..:.|:....::::|.:||||||.::.::.|..|| :||:
 Frog     1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KLQI 64

  Fly   538 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANK 602
            ||.||||||..:|..||:.|.|..:|:|||...:|:.|.:|.:::|...    ...:..:|:.||
 Frog    65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA----SENVNKLLVGNK 125

  Fly   603 CDQEKQGIITQPEKMDEYVRENGFAG-----WFETSAKENINIDEAARALVNKILINDKLISADL 662
            ||       ...:|:.:|.....||.     :.|||||...|:::|...:..:  |..::.....
 Frog   126 CD-------LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE--IKKRMGPGAT 181

  Fly   663 ADGDKFNLSAADATGSDAKNKC 684
            |.|.:.|:.........:...|
 Frog   182 AGGQEKNVKIQSTPVKQSSGGC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 2/7 (29%)
Rab32_Rab38 484..686 CDD:206692 62/206 (30%)
rab1aNP_001004787.1 Rab1_Ypt1 10..175 CDD:206661 59/178 (33%)

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