DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and Rab7

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster


Alignment Length:218 Identity:63/218 - (28%)
Similarity:114/218 - (52%) Gaps:20/218 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   477 SDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIA 541
            |.:::.|.|::::|:...||||.:.:||::.||..|:||||.||..|.:..: :.:|.:|:||.|
  Fly     2 SGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVN-DRVVTMQIWDTA 65

  Fly   542 GQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANKCDQE 606
            |||||.::...:|:.|....:|:|||...:|..:..|:::...:....|....|.::|.||.|.:
  Fly    66 GQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLD 130

  Fly   607 KQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKIL--------INDKLISADLA 663
            .:.:.|:  :..::.:......::||||||.||::.|.:.:....|        |||        
  Fly   131 NRQVSTR--RAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVIND-------- 185

  Fly   664 DGDKFNLSAADATGSDAKNKCSC 686
            ..|:..|.:.:....:..| |.|
  Fly   186 FPDQITLGSQNNRPGNPDN-CQC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 60/209 (29%)
RAB 484..652 CDD:197555 52/167 (31%)
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 53/172 (31%)
RAB 9..174 CDD:197555 52/167 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454529
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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