DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and Rab1

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster


Alignment Length:189 Identity:61/189 - (32%)
Similarity:106/189 - (56%) Gaps:27/189 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 MTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 537
            |:|.:.:.::|:|:|:||:.|.||:..:.|:....::::|.:||||||.::.::.|..|| :||:
  Fly     1 MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KLQI 64

  Fly   538 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPC-----I 597
            ||.||||||..:|..||:.|.|..:|:|.|...:|:.|.:|.|:::.         ..|     :
  Fly    65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIER---------YACENVNKL 120

  Fly   598 LLANKCDQEKQGIITQPEKMD-----EYVRENGFAGWFETSAKENINIDEAARALVNKI 651
            |:.||.|      :|..:.:|     ||..:.|.. :.|||||...|:::|...:..:|
  Fly   121 LVGNKSD------LTTKKVVDHTTAAEYAAQLGIP-FLETSAKSATNVEQAFMTMAAEI 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 58/178 (33%)
RAB 484..652 CDD:197555 58/178 (33%)
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 59/180 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454483
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24073
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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