DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and Rab1

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster


Alignment Length:189 Identity:61/189 - (32%)
Similarity:106/189 - (56%) Gaps:27/189 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 MTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 537
            |:|.:.:.::|:|:|:||:.|.||:..:.|:....::::|.:||||||.::.::.|..|| :||:
  Fly     1 MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KLQI 64

  Fly   538 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPC-----I 597
            ||.||||||..:|..||:.|.|..:|:|.|...:|:.|.:|.|:::.         ..|     :
  Fly    65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIER---------YACENVNKL 120

  Fly   598 LLANKCDQEKQGIITQPEKMD-----EYVRENGFAGWFETSAKENINIDEAARALVNKI 651
            |:.||.|      :|..:.:|     ||..:.|.. :.|||||...|:::|...:..:|
  Fly   121 LVGNKSD------LTTKKVVDHTTAAEYAAQLGIP-FLETSAKSATNVEQAFMTMAAEI 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 2/7 (29%)
Rab32_Rab38 484..686 CDD:206692 58/178 (33%)
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 59/180 (33%)

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