DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab5ab

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_957264.1 Gene:rab5ab / 393945 ZFINID:ZDB-GENE-040122-3 Length:216 Species:Danio rerio


Alignment Length:204 Identity:63/204 - (30%)
Similarity:105/204 - (51%) Gaps:15/204 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 YKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQERFGN 548
            :|::::||...||:|.:.|:|...|.:...:|||..|..:.|..| :|.|:.::||.|||||:.:
Zfish    22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLD-DTTVKFEIWDTAGQERYHS 85

  Fly   549 MTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLA-NKCD-QEKQGII 611
            :..:||:.|..|.:|:|:|...:|.....|.::|..:     .||...|.|| ||.| ..|:.:.
Zfish    86 LAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQ-----ASPNIVIALAGNKADLANKRALD 145

  Fly   612 TQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILIND-KLISADLADGDKFNLSAADA 675
            .|..:  .|..:|... :.|||||.::|:.|...|:..|:..|: :...|:.|.....:|:   .
Zfish   146 FQDAQ--SYADDNSLL-FMETSAKTSMNVSEIFMAIAKKLPKNEPQPAGANTARNRGVDLT---E 204

  Fly   676 TGSDAKNKC 684
            |...||..|
Zfish   205 TAQPAKGPC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021
Rab32_Rab38 484..686 CDD:206692 63/204 (31%)
rab5abNP_957264.1 Rab5_related 21..183 CDD:206653 55/169 (33%)
Blue background indicates that the domain is not in the aligned region.

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