DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab5ab

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_957264.1 Gene:rab5ab / 393945 ZFINID:ZDB-GENE-040122-3 Length:216 Species:Danio rerio


Alignment Length:204 Identity:63/204 - (30%)
Similarity:105/204 - (51%) Gaps:15/204 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 YKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQERFGN 548
            :|::::||...||:|.:.|:|...|.:...:|||..|..:.|..| :|.|:.::||.|||||:.:
Zfish    22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLD-DTTVKFEIWDTAGQERYHS 85

  Fly   549 MTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLA-NKCD-QEKQGII 611
            :..:||:.|..|.:|:|:|...:|.....|.::|..:     .||...|.|| ||.| ..|:.:.
Zfish    86 LAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQ-----ASPNIVIALAGNKADLANKRALD 145

  Fly   612 TQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILIND-KLISADLADGDKFNLSAADA 675
            .|..:  .|..:|... :.|||||.::|:.|...|:..|:..|: :...|:.|.....:|:   .
Zfish   146 FQDAQ--SYADDNSLL-FMETSAKTSMNVSEIFMAIAKKLPKNEPQPAGANTARNRGVDLT---E 204

  Fly   676 TGSDAKNKC 684
            |...||..|
Zfish   205 TAQPAKGPC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 63/204 (31%)
RAB 484..652 CDD:197555 55/169 (33%)
rab5abNP_957264.1 Rab5_related 21..183 CDD:206653 55/169 (33%)
Ras 23..184 CDD:278499 55/169 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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