DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab5c

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_958909.1 Gene:rab5c / 386807 ZFINID:ZDB-GENE-031118-30 Length:221 Species:Danio rerio


Alignment Length:170 Identity:56/170 - (32%)
Similarity:93/170 - (54%) Gaps:11/170 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 YKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQERFGN 548
            :|::::||...||:|.:.|:|...|.:...:|||..|..:.|..| :|.|:.::||.|||||:.:
Zfish    23 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLD-DTTVKFEIWDTAGQERYHS 86

  Fly   549 MTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLA-NKCD-QEKQGII 611
            :..:||:.|..|.:|:|:|.:.||.....|.::|..:     .||...|.|| ||.| ..|:.:.
Zfish    87 LAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQ-----ASPNIVIALAGNKADLANKRAVD 146

  Fly   612 TQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKI 651
            .|  :...|..:|... :.|||||..:|::|...|:..|:
Zfish   147 FQ--EAQAYADDNSLL-FMETSAKTAMNVNEIFMAIAKKL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021
Rab32_Rab38 484..686 CDD:206692 56/170 (33%)
rab5cNP_958909.1 Rab5_related 22..184 CDD:206653 56/170 (33%)
Blue background indicates that the domain is not in the aligned region.

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