DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab1ab

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001007162.1 Gene:rab1ab / 368883 ZFINID:ZDB-GENE-030616-564 Length:201 Species:Danio rerio


Alignment Length:176 Identity:59/176 - (33%)
Similarity:101/176 - (57%) Gaps:17/176 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQER 545
            ::|:|:|:||:.|.||:..:.|:....::::|.:||||||.::.::.|..|| :||:||.|||||
Zfish     6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KLQIWDTAGQER 69

  Fly   546 FGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANKCDQEKQGI 610
            |..:|..||:.|.|..:|:|||...:|:.|.:|.:::|...    ...:..:|:.||||      
Zfish    70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA----SENVNKLLVGNKCD------ 124

  Fly   611 ITQPEKMDEYVRENGFAG-----WFETSAKENINIDEAARALVNKI 651
             ...:|:.:|.....||.     :.|||||...|:::|...:..:|
Zfish   125 -LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 59/176 (34%)
Rab32_Rab38 484..686 CDD:206692 58/173 (34%)
rab1abNP_001007162.1 Rab1_Ypt1 7..172 CDD:206661 59/175 (34%)

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