DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab32 and Rab32

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001102372.1 Gene:Rab32 / 365042 RGDID:1559997 Length:223 Species:Rattus norvegicus


Alignment Length:221 Identity:141/221 - (63%)
Similarity:170/221 - (76%) Gaps:4/221 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 MDQEMEPAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWD 528
            :.|:.|.|  |:..:.||||:|:|||||||.||||.|||||||.||||||||||||||||||.||
  Rat     6 LGQQGETA--TAVPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNWD 68

  Fly   529 ANTIVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSP 593
            :.|:|||||||||||||||||||||||||:|||:|||::||.|||.|.|||.||||||.||:|||
  Rat    69 SRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSP 133

  Fly   594 IPCILLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKLI 658
            ||.:||||||||:|.. ...|.:|:::.:::||.||||||||:|||||||.|.||..:|.|.:..
  Rat   134 IPAVLLANKCDQKKDS-SQSPSQMNQFCKDHGFIGWFETSAKDNINIDEATRFLVENMLANQQSF 197

  Fly   659 SADLADGDKFNLSAADATGSDAKNKC 684
            ..:..|.||..|.....| :..|::|
  Rat   198 PREEIDMDKIKLVEEPPT-TKPKSQC 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 4/16 (25%)
Rab32_Rab38 484..686 CDD:206692 133/201 (66%)
Rab32NP_001102372.1 Rab32_Rab38 24..222 CDD:206692 133/197 (68%)

Return to query results.
Submit another query.