DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and Rab3

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001356961.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster


Alignment Length:225 Identity:76/225 - (33%)
Similarity:122/225 - (54%) Gaps:17/225 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 EPAIMTSTSDKR-EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALK-VLQWDANT 531
            :|......:|:. ::::|:|:||....|||||:.||....|:..:.:|:|:||.:| |.:.|.. 
  Fly     6 DPKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKR- 69

  Fly   532 IVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPC 596
             |:||:||.|||||:..:|..||:.|:|..:::|||...:|:.|..|...:  |....|.:.:  
  Fly    70 -VKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQI--KTYSWDNAQV-- 129

  Fly   597 ILLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL---I 658
            ||:.||||.|.|.:|:. |:..:...:.| ..:||||||||:|:......||:  :|.||:   :
  Fly   130 ILVGNKCDMEDQRVISF-ERGRQLADQLG-VEFFETSAKENVNVKAVFERLVD--IICDKMSESL 190

  Fly   659 SAD--LADGDKFNLSAADATGSDAKNKCSC 686
            .||  |..|.:......|.........|:|
  Fly   191 DADPTLVGGGQKGQRLTDQPQGTPNANCNC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 73/207 (35%)
RAB 484..652 CDD:197555 64/168 (38%)
Rab3NP_001356961.1 Rab3 21..185 CDD:206657 65/173 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454270
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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