DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab5aa

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_958893.1 Gene:rab5aa / 337737 ZFINID:ZDB-GENE-030131-139 Length:216 Species:Danio rerio


Alignment Length:170 Identity:54/170 - (31%)
Similarity:92/170 - (54%) Gaps:11/170 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 YKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQERFGN 548
            :|::::||...||:|.:.|:|...|.:...:|||..|..:.|..| :|.|:.::||.|||||:.:
Zfish    22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLD-DTTVKFEIWDTAGQERYHS 85

  Fly   549 MTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSP-IPCILLANKCD-QEKQGII 611
            :..:||:.|..|.:|:|:|...:|.....|.::|..:     .|| |...|..||.| ..|:.:.
Zfish    86 LAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQ-----ASPNIVIALSGNKADLANKRAVD 145

  Fly   612 TQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKI 651
            .|..:  .|..:|... :.|||||.::|::|...|:..|:
Zfish   146 FQDAQ--SYADDNSLL-FMETSAKTSMNVNEIFMAIAKKL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 54/170 (32%)
RAB 484..652 CDD:197555 54/170 (32%)
rab5aaNP_958893.1 Rab5_related 21..183 CDD:206653 54/170 (32%)
Ras 23..184 CDD:278499 54/169 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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