DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and Rab5b

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_803130.1 Gene:Rab5b / 19344 MGIID:105938 Length:215 Species:Mus musculus


Alignment Length:231 Identity:66/231 - (28%)
Similarity:108/231 - (46%) Gaps:36/231 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 MTSTSDKREH---------LYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWD 528
            |||.|..|.:         .:|::::||...||:|.:.|:|...|.:...:|||..|..:.:..|
Mouse     1 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLD 65

  Fly   529 ANTIVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSP 593
             :|.|:.::||.|||||:.::..:||:.|..|.:|:|:|...||.....|.::|..:     .||
Mouse    66 -DTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQ-----ASP 124

  Fly   594 IPCILLA-NKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 657
            ...|.|| ||.|...:.:: :.|:...|..:|... :.|||||..:|:::...|:..|       
Mouse   125 SIVIALAGNKADLANKRMV-EYEEAQAYADDNSLL-FMETSAKTAMNVNDLFLAIAKK------- 180

  Fly   658 ISADLADGDKFNLSAA-------DATGSDAKNKCSC 686
                |...:..||..|       |......:||..|
Mouse   181 ----LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 60/209 (29%)
RAB 484..652 CDD:197555 53/168 (32%)
Rab5bNP_803130.1 Rab5_related 20..182 CDD:206653 53/180 (29%)
Effector region. /evidence=ECO:0000255 49..57 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..215 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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