DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab32 and R07B1.8

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_509656.2 Gene:R07B1.8 / 187649 WormBaseID:WBGene00001608 Length:425 Species:Caenorhabditis elegans


Alignment Length:139 Identity:30/139 - (21%)
Similarity:52/139 - (37%) Gaps:40/139 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 EPSPAKKSGKSRPKSDTDYLTPAAE---------ERKPRKKTTTTTVTTRDTSSSTRTTKLLVSK 232
            ||:.||...:..|...| :.||.|.         |...:.:.|......::.:...::|::   :
 Worm   306 EPTSAKIQEQVTPAQLT-FDTPGAIVNGQCMCACEHSAKNEATRLFANKKNNNDVEKSTQI---E 366

  Fly   233 KKPQSPERESPSASPSPLITTTESTRD-TPPRERAPAKPSRVQSASGTGAVRKSQSSSASSRKLE 296
            ||   ||::.|.....  :...|:.:| .||:               |.|||..::|.      .
 Worm   367 KK---PEKQGPEIQEE--VVEMETVKDEQPPK---------------TSAVRFKENSP------R 405

  Fly   297 LMQQQQQRG 305
            |||..:..|
 Worm   406 LMQPSEAAG 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692
RAB 484..652 CDD:197555
R07B1.8NP_509656.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4423
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.