DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab32 and rab-33

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_499314.1 Gene:rab-33 / 176470 WormBaseID:WBGene00004283 Length:307 Species:Caenorhabditis elegans


Alignment Length:213 Identity:65/213 - (30%)
Similarity:108/213 - (50%) Gaps:20/213 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 PENAKPMPAFGDLTMDQEMEPAIMTSTSD--KREHLYKILVIGELGTGKTSFIKRYVHQFFSQNY 512
            |....|:|...:.......:.|:..|::.  |::..:|::::|....|||....|:....|.::.
 Worm    65 PTAPPPIPPAPEAVTAGPKKMALAPSSTKTYKQKRTFKVIIVGNAAVGKTCLSFRFCCGRFPEHT 129

  Fly   513 RATIGVDFALK--VLQWDANTIVRLQLWDIAGQERF-GNMTRVYYKEAVGAFIVFDVTRSGTFDC 574
            .|||||||..:  |::   |.::|:||||.|||||: .::...||:.......|:|||...:|:.
 Worm   130 EATIGVDFRERSCVIE---NELLRVQLWDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFND 191

  Fly   575 VSKWKEDLDSKVQLPDGSPIPCILLANKCDQEKQGIITQPEKMDE---YVRENGFAGWFETSAK- 635
            ::.|.::.: |..|...|.:|.||:.||||.|    .|.....||   :...|..| .|||||| 
 Worm   192 LALWIKECE-KHGLVGDSEVPRILIGNKCDVE----CTNRVSTDEAQMFADRNNMA-LFETSAKL 250

  Fly   636 --ENINIDEAARALVNKI 651
              |..:::.....|::|:
 Worm   251 ASEADHVESIFLTLLHKL 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 59/177 (33%)
RAB 484..652 CDD:197555 59/177 (33%)
rab-33NP_499314.1 Rab33B_Rab33A 99..270 CDD:133315 59/179 (33%)
RAB 101..270 CDD:197555 59/177 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.