DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab-5

DIOPT Version :9

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_492481.1 Gene:rab-5 / 172755 WormBaseID:WBGene00004268 Length:208 Species:Caenorhabditis elegans


Alignment Length:204 Identity:58/204 - (28%)
Similarity:101/204 - (49%) Gaps:18/204 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 YKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQERFGN 548
            :|::::||...||:|.:.|:|...|.:...:|||..|..:.:..|..|| :.::||.|||||:.:
 Worm    20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATI-KFEIWDTAGQERYHS 83

  Fly   549 MTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSP-IPCILLANKCDQEKQGIIT 612
            :..:||:.|..|.:|:|:|...:|.....|.::|..:     .|| |...|..||.|...:..: 
 Worm    84 LAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQ-----ASPNIVMALAGNKADVANKRTV- 142

  Fly   613 QPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKLISADLADGDKFNLSAADATG 677
            :.|:.:.|..:|... :.|||||.::|:::...|:..|:.|..       |.|:.  ....|...
 Worm   143 EYEEANAYAEDNALL-FMETSAKTSMNVNDIFMAIAKKLPIGP-------AQGEP--TGTVDMNQ 197

  Fly   678 SDAKNKCSC 686
            ...:.|.||
 Worm   198 PQQQQKGSC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 56/202 (28%)
RAB 484..652 CDD:197555 51/168 (30%)
rab-5NP_492481.1 Rab5_related 19..181 CDD:206653 51/168 (30%)
Ras 21..181 CDD:278499 51/167 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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