DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab32 and Rab8a

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_446450.2 Gene:Rab8a / 117103 RGDID:621144 Length:207 Species:Rattus norvegicus


Alignment Length:194 Identity:63/194 - (32%)
Similarity:108/194 - (55%) Gaps:11/194 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 MTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 537
            |..|.|   :|:|:|:||:.|.|||..:.|:....|:..:.:|||:||.::.::.|...| :||:
  Rat     1 MAKTYD---YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KLQI 61

  Fly   538 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANK 602
            ||.||||||..:|..||:.|:|..:|:|:|...:||.:..|..:::...    .:.:..::|.||
  Rat    62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHA----SADVEKMILGNK 122

  Fly   603 CDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILIN-DKLISADLADG 665
            ||...:..::: |:.::...:.|.. :.|||||.|||::.|...|...|... ||.:..:...|
  Rat   123 CDVNDKRQVSK-ERGEKLALDYGIK-FMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQG 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 3/7 (43%)
Rab32_Rab38 484..686 CDD:206692 59/183 (32%)
Rab8aNP_446450.2 Rab8_Rab10_Rab13_like 6..172 CDD:206659 58/175 (33%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 10/16 (63%)

Return to query results.
Submit another query.