DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab32 and rab3b

DIOPT Version :10

Sequence 1:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001093746.1 Gene:rab3b / 100101786 XenbaseID:XB-GENE-483427 Length:217 Species:Xenopus tropicalis


Alignment Length:228 Identity:79/228 - (34%)
Similarity:124/228 - (54%) Gaps:25/228 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 MTSTSDKR-----------EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQ 526
            |.|.:|.|           ::::|:|:||....|||||:.||....|:..:.:|:|:||.:|.: 
 Frog     1 MASATDSRYGYRDVSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV- 64

  Fly   527 WDANTIVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDG 591
            :..:..|:||:||.|||||:..:|..||:.|:|..:::|:|...:::.|..|...:  |....|.
 Frog    65 YRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITSESSYNAVQDWATQI--KTYSWDN 127

  Fly   592 SPIPCILLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDK 656
            :.:  ||:.||||.|::.:|. |||......:.||. :||.||||||.:.:....||:  :|.||
 Frog   128 AQV--ILVGNKCDMEEERVIA-PEKGKHLADQLGFE-FFEASAKENIQVKQVFERLVD--IICDK 186

  Fly   657 L---ISADLADGDKFNLSAADATGSDAKNKCSC 686
            :   :..|...|.| ||...| |......||||
 Frog   187 MSESLDTDQPPGGK-NLRFTD-TAPPIHQKCSC 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 4/18 (22%)
Rab32_Rab38 484..686 CDD:206692 73/204 (36%)
rab3bNP_001093746.1 Rab3 22..186 CDD:206657 62/172 (36%)

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