Protein Alignment Rme-8 and l(3)80Fg

DIOPT Version :10

• Sequence 1: NP_610467.1
• Gene: Rme-8 / 35939
• FlyBaseID: FBgn0015477
• Length: 2408
• Species: Drosophila melanogaster
• Sequence 2: NP_001015187.2
• Gene: l(3)80Fg / 3354941
• FlyBaseID: FBgn0287183
• Length: 780
• Species: Drosophila melanogaster
• Alignment Length: 289
• Identity: 52/289 - (17%)
• Similarity: 101/289 - (34%)
• Gaps: 123/289 - (42%)

  Fly  1252 LFCHIYYLRHLCDTQKFPNWPISDPVQLLKHTLDAWRKEVEKKPPQMTIQQAYQDLGIDLTKTPK 1316
            :.|...|: |:|.:       ::||                           |..|||:    .|
  Fly    15 VLCTTSYI-HVCSS-------LNDP---------------------------YAILGIN----KK 40

  Fly  1317 PDESMIRKSYYKLAQMYHPD--KNPNGREIFEKVNQAYEFLCSRNVWSSGGPDPNNIVLILRTQS 1379
            .....||::|.:||:.:|||  ||..|.|.|.::..|||.|...:                  :.
  Fly    41 ATTYEIREAYKELAKKWHPDKVKNDYGAEKFIQIKLAYEILADLD------------------RR 87

  Fly  1380 ILFERY--PDVLRPY-----KYAGYPQLIKTI---------RLETRDDELF-------------- 1414
            .:|:||  .|:...|     .|:.|.:.  |:         |.:.:.|..|
  Fly    88 RIFDRYGVSDINSQYFQKKHDYSEYNRF--TLNQNDDDFGQRFDIKQDIAFYQKLSITENYFEKM 150

  Fly  1415 -----SKEAQLLTAASELCYHTVHCSALNAEELRREEGIEALLEAYTRCVSILGVDSKPDSLHYQ 1474
                 :|:..::...::.|:   .|:              .:::|:.:.:.:|    :|..:::.
  Fly   151 ILSKNAKKVHVVMFYNDWCF---KCT--------------RIVDAFKKILELL----QPIGINFA 194

  Fly  1475 VISNVTRCFEVACNFEKCKQKIIQLPQLL 1503
            .::.|    .....|.||..:  ::|||:
  Fly   195 TVNAV----HEESVFRKCGAR--EVPQLV 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rme-8	NP_610467.1	RME-8_N	12..835	CDD:466078
		GYF_2	972..1026	CDD:464112
		DnaJ	1304..1356	CDD:395170	21/53 (40%)
		HEAT repeat	2174..2200	CDD:293787
		HEAT repeat	2212..2243	CDD:293787
		HEAT repeat	2253..2282	CDD:293787
		HEAT repeat	2291..2327	CDD:293787
l(3)80Fg	NP_001015187.2	DnaJ	30..>94	CDD:440252	26/112 (23%)
		TRX_DnaJ	134..244	CDD:239261	14/111 (13%)