DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rme-8 and CG7872

DIOPT Version :9

Sequence 1:NP_610467.1 Gene:Rme-8 / 35939 FlyBaseID:FBgn0015477 Length:2408 Species:Drosophila melanogaster
Sequence 2:NP_573044.1 Gene:CG7872 / 32493 FlyBaseID:FBgn0030658 Length:333 Species:Drosophila melanogaster


Alignment Length:153 Identity:38/153 - (24%)
Similarity:59/153 - (38%) Gaps:45/153 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1301 QQAYQDLGIDLTKTPKPDESMIRKSYYKLAQMYHPDKNPNGREI-------FEKVNQAYEFLC-- 1356
            :..|..||:    |.:..:|.|.|:|.:||:.||||.: .|.|.       |:.|..|||.|.  
  Fly    30 ENCYDVLGV----TRESSKSEIGKAYRQLARRYHPDLH-RGAEAKAAAETQFKLVATAYEILRDE 89

  Fly  1357 -SRNVWSSGGPDPNN----------------------IVLILRTQSIL-----FERYPDVLRPYK 1393
             ||..:.....:|:.                      ||::|...|::     ::||...:   |
  Fly    90 ESRTDYDYMLDNPDAYYAHYYRYYRRRVAPKVDVRVVIVVVLTIVSVIQYYSGWQRYDSAI---K 151

  Fly  1394 YAGYPQLIKTIRLETRDDELFSK 1416
            |.......:...||...||:..|
  Fly   152 YFATVPKYRNQALEIARDEIQEK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rme-8NP_610467.1 DUF4339 972..1020 CDD:290937
DnaJ 1304..1356 CDD:278647 21/58 (36%)
HEAT repeat 2174..2200 CDD:293787
HEAT repeat 2212..2243 CDD:293787
HEAT repeat 2253..2282 CDD:293787
HEAT repeat 2291..2327 CDD:293787
CG7872NP_573044.1 DnaJ 31..96 CDD:278647 24/69 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464439
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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