DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42382 and LOC100488382

DIOPT Version :10

Sequence 1:NP_523665.2 Gene:CG42382 / 35938 FlyBaseID:FBgn0259728 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_002943169.1 Gene:LOC100488382 / 100488382 XenbaseID:XB-GENE-29079179 Length:227 Species:Xenopus tropicalis


Alignment Length:216 Identity:61/216 - (28%)
Similarity:95/216 - (43%) Gaps:54/216 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLVADYSDSSESDEDSS------------------------GQFSEDGETKSAAPAKNEKTPPP 41
            :.|::.|..|...||:.:                        |.|::.|||:......|......
 Frog     8 LGLLSGYISSGSDDEEETVQKAICTPTSSVNCFKNPHSRSEEGPFAKKGETEKECMHVNISDSSV 72

  Fly    42 KLPSASQAFSQGAGKGDVFNNPFLEAELHKTASLERHVKMVDNDAHQKLKNGRKICWNFRR-GRC 105
            :||:........:|.|.||:|||.|.|..:.:.||||||:.||:    ...||..|.:::: |||
 Frog    73 RLPAPVLGSQNTSGFGGVFSNPFHEEEQAQMSILERHVKLSDNN----WALGRGACLSYQKDGRC 133

  Fly   106 RFGTSCQYAHDSDLS-------VDEAAEKSALPDQSVPVVVEAAPGN---------------FNR 148
            |:||.|:|:|.|||.       |.|......|.:.|..:::|   ||               ..:
 Frog   134 RYGTRCKYSHGSDLPQGNARAVVQELGTNYLLNETSGAILME---GNKRKKDEHDVDETRQCKEK 195

  Fly   149 RKRPGLGDALEPGKRVMKSYK 169
            :|:.||.::|.|.|:.:|.||
 Frog   196 KKKVGLTNSLIPPKKYLKDYK 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42382NP_523665.2 zf_CCCH_4 97..115 CDD:465719 9/18 (50%)
LOC100488382XP_002943169.1 zf-CCCH 120..144 CDD:459885 11/23 (48%)

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