Protein Alignment Rad51D and RAD51

DIOPT Version :9

• Sequence 1: NP_610466.2
• Gene: Rad51D / 35937
• FlyBaseID: FBgn0033389
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_011021.3
• Gene: RAD51 / 856831
• SGDID: S000000897
• Length: 400
• Species: Saccharomyces cerevisiae
• Alignment Length: 340
• Identity: 82/340 - (24%)
• Similarity: 130/340 - (38%)
• Gaps: 109/340 - (32%)

  Fly    38 ADEKKLHE---------LWA-----INIQSVRELKKE------LSLLPKGSVDEGTPDFN----- 77
            ||.|||.|         .:|     :.|:.:.|.|.:      ..|:|.|.|.  ..||:
Yeast    94 ADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAARLVPMGFVT--AADFHMRRSE 156

  Fly    78 ---YDTGIEELDKLL-DSVEQPFKPGRVWELCGQPGVGKTQLLYTLALNF-----VWKHSQAVLF 133
               ..||.:.||.|| ..||    .|.:.||.|:...||:||.:|||:..     :.......|:
Yeast   157 LICLTTGSKNLDTLLGGGVE----TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLY 217

  Fly   134 IDTKREFSCKRIQDMLRAREVDEEASERAMKGIRVVQAAT--GADINDLLKSF--------DHQL 188
            |||:..|                       :.:|:|..|.  |.|.:|.|.:.        ||||
Yeast   218 IDTEGTF-----------------------RPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQL 259

  Fly   189 -----TAETHASMQTKLVLIDSLAACF-AFYRGRRMRDVRKSVLTELACKIRKLALR-GVAFVIG 246
                 .|:..:..:..|:::||:.|.: ..:.||.....|:..|.:....:::||.: |||.|:.
Yeast   260 RLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVT 324

  Fly   247 NVSFFENNKDSCGDDGEQNGDDEEVTRQQLEPMLGSYWSSVATLRLSVE---------------- 295
            |....:      .|.|.....|.:      :|:.|:..:..:|.||..:
Yeast   325 NQVVAQ------VDGGMAFNPDPK------KPIGGNIMAHSSTTRLGFKKGKGCQRLCKVVDSPC 377

  Fly   296 LPEEE-DFTLQDDGL 309
            |||.| .|.:.:||:
Yeast   378 LPEAECVFAIYEDGV 392

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad51D	NP_610466.2	P-loop_NTPase	80..336	CDD:304359	66/270 (24%)
		radB	80..335	CDD:236482	66/270 (24%)
RAD51	NP_011021.3	recomb_RAD51	83..397	CDD:274048	82/340 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810