Protein Alignment Rad51D and XRCC2

DIOPT Version :9

• Sequence 1: NP_610466.2
• Gene: Rad51D / 35937
• FlyBaseID: FBgn0033389
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001330643.1
• Gene: XRCC2 / 836573
• AraportID: AT5G64520
• Length: 378
• Species: Arabidopsis thaliana
• Alignment Length: 268
• Identity: 52/268 - (19%)
• Similarity: 91/268 - (33%)
• Gaps: 71/268 - (26%)

  Fly    95 PFKPGRVWELCGQPGVGKTQLLYTLALNFV----WK--H----SQAVLFIDTKREFSCKRIQDML 149
            |.:.|.|.|:.|.....|||:|...|::.:    |.  |    .:.|||:|....|...|:..||
plant    39 PLRAGNVVEITGASTSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQML 103

  Fly   150 RAREV--------------------------------DEEASERAMKGIRVVQAATGADINDLLK 182
            :.|.:                                |||.....||....|:.....::...||
plant   104 KHRLLQANWLGNGAWWQLEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLK 168

  Fly   183 SF------DHQLTAETHASMQTKLVLIDSLAACFAFYRGRRMRDV-------RKS-----VLTEL 229
            .|      .:::..:.....|..:::|||:.   ||:...|:...       |||     |:..:
plant   169 YFTVLQTLHYRIQQQEACGSQVGVLMIDSIG---AFHWTDRLSSSLALETHNRKSLSLTNVVETI 230

  Fly   230 ACKIRKLALRGVAFVIGNVSFF--------ENNKDSCGDDGEQNGDDEEVTRQQLEPMLGSYWSS 286
            ..:::||.|.....|:......        |||:....:|........:..:......:.|.|.:
plant   231 VQELKKLLLVHSLVVLATKGTIYEEKYPANENNRKVSSNDHFSGNVASKAQQPPFREFMPSSWQA 295

  Fly   287 VATLRLSV 294
            ..|.::.:
plant   296 FVTHKIII 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad51D	NP_610466.2	P-loop_NTPase	80..336	CDD:304359	52/268 (19%)
		radB	80..335	CDD:236482	52/268 (19%)
XRCC2	NP_001330643.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910