Protein Alignment Rad51D and rad51d

DIOPT Version :9

• Sequence 1: NP_610466.2
• Gene: Rad51D / 35937
• FlyBaseID: FBgn0033389
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_996959.2
• Gene: rad51d / 404608
• ZFINID: ZDB-GENE-040426-2490
• Length: 327
• Species: Danio rerio
• Alignment Length: 308
• Identity: 78/308 - (25%)
• Similarity: 143/308 - (46%)
• Gaps: 49/308 - (15%)

  Fly    11 CTGRLLSEYQLNLLRKNNICSLIDFYDADEKKLHELWAINIQSV----RELKKELSLLPKGSVD- 70
            |.|  ::|..:..|:..:|.::.||...:.::|.:..:::.:::    |.|..:.:..|....|
Zfish     9 CPG--INEDFIKALQTEDIRTVEDFVSWNPEELAQKCSLSYKALVAVRRVLLAQYTAYPISGADL 71

  Fly    71 -----EGTPDFNYDTGIEELDKLLDSVEQPFKPGRVWELCGQPGVGKTQLLYTLALNFVWKHSQA 130
                 ..|...:  ||...|||||||   ....|.:.||.|.||.||||:.:::|:|...:..|.
Zfish    72 YEELLSSTAILS--TGSPSLDKLLDS---GLYTGEITELTGSPGSGKTQVCFSVAVNISHQLKQT 131

  Fly   131 VLFIDTKREFSCKRIQDMLRAREVDEEASERAMKGIRVVQAATGADINDL------LKSFDHQLT 189
            |::||||......|:..||:.:..:|:....|::.|:|.:.   .|:..|      |:|...|.|
Zfish   132 VVYIDTKGGMCANRLLQMLQTKTSNEQEQMEALQKIKVFRV---FDVFSLLACLQNLRSTGLQKT 193

  Fly   190 AETHASMQTKLVLIDSLAACFAFYRGRRMRDVRKSVLTELACKIRKLALR-GVAFVIGNVSFFEN 253
            :....|:  |.:::||::|..:...|.:..: ..|:|.::|.:::.:|.. .:|.::.|    ..
Zfish   194 SVGGGSV--KALMVDSVSAVLSPILGGKQNE-GMSLLMQVAGELKMIAKDFNIAVLVTN----HV 251

  Fly   254 NKDSCGDDGEQNGDDEEVTRQQLEPMLGSYWSSVATLRLSVELPEEED 301
            .||..|               ||:..||..||.|...|:.::..|.|:
Zfish   252 TKDGNG---------------QLKAGLGLSWSHVPRTRVLLQRVENEE 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad51D	NP_610466.2	P-loop_NTPase	80..336	CDD:304359	65/229 (28%)
		radB	80..335	CDD:236482	65/229 (28%)
rad51d	NP_996959.2	P-loop_NTPase	82..300	CDD:304359	65/233 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55923
OrthoDB	1	1.010	-	-		D1214879at2759
OrthoFinder	1	1.000	-	-		FOG0006192
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_105130
Panther	1	1.100	-	-	LDO	PTHR46457
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4853
SonicParanoid	1	1.000	-	-		X5910
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	12	11.820