Protein Alignment Rad51D and Rad51d

DIOPT Version :10

• Sequence 1: NP_610466.2
• Gene: Rad51D / 35937
• FlyBaseID: FBgn0033389
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: XP_063125156.1
• Gene: Rad51d / 303375
• RGDID: 1306944
• Length: 342
• Species: Rattus norvegicus
• Alignment Length: 298
• Identity: 85/298 - (28%)
• Similarity: 143/298 - (47%)
• Gaps: 34/298 - (11%)

  Fly    11 CTGRLLSEYQLNLLRKNNICSLIDFYDADEKKLHELWAINIQSV----RELKKELSLLPKGSVD- 70
            |.|  |:|..:.|||...|.::.|...||.:::.:...::.:::    |.|..:.|..|....|
  Rat     9 CPG--LTEEIVQLLRGRKIKTVADLAAADLEEVAQKCGLSYKALVALRRVLLAQFSAFPLNGADL 71

  Fly    71 ---EGTPDFNYDTGIEELDKLLDSVEQPFKPGRVWELCGQPGVGKTQLLYTLALNFVWKHSQAVL 132
               ..|......|||..||||||:   ....|.:.|:.|.||.||||:...:|.|......|.||
  Rat    72 YEELKTSTAILSTGIGSLDKLLDA---GLYTGELTEIVGGPGSGKTQVCLCVAANVAHSLQQNVL 133

  Fly   133 FIDTKREFSCKRIQDMLRAREVDEEASERAMKGIRVVQAATGADINDLLKSFDHQLTAETHASMQ 197
            ::|:....:..|:..:|:||..|||....|::.|:||.:.....:.|:|:.....:..:..||..
  Rat   134 YVDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVHSFDIFQMLDMLQDLRGTMAQQATASSG 198

  Fly   198 T-KLVLIDSLAACFAFYRGRRMRDVRKSVLTELACKIRKLAL-RGVAFVIGNVSFFENNKDSCGD 260
            | |:|::||:.|..|...|.:.|: ..:::.:||.:::.||. .|||.|:.|  ....::||
  Rat   199 TVKVVIVDSVTAVVAPLLGGQQRE-GLALMMQLARELKILARDLGVAVVVTN--HLTRDRDS--- 257

  Fly   261 DGEQNGDDEEVTRQQLEPMLGSYWSSVATLRLSVELPE 298
                         ::.:|.||..||.|.:.|:.:|:.|
  Rat   258 -------------RRFKPALGRSWSFVPSTRILLEVFE 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad51D	NP_610466.2	P-loop containing Nucleoside Triphosphate Hydrolases	94..300	CDD:476819	59/207 (29%)
Rad51d	XP_063125156.1	None