Protein Alignment Rad51D and Rad51b

DIOPT Version :9

• Sequence 1: NP_610466.2
• Gene: Rad51D / 35937
• FlyBaseID: FBgn0033389
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: XP_030102481.1
• Gene: Rad51b / 19363
• MGIID: 1099436
• Length: 381
• Species: Mus musculus
• Alignment Length: 361
• Identity: 80/361 - (22%)
• Similarity: 129/361 - (35%)
• Gaps: 109/361 - (30%)

  Fly    16 LSEYQ------------LNLLRKNNICSLIDFYDADEKKLH---ELWAINIQSVRELKKELSLLP 65
            ||.||            |.|::...:.     |....:.||   :..|..:|:..|||...|.
Mouse    30 LSRYQIVNCQHFLSLSPLELMKVTGLS-----YRGVHELLHTVSKACAPQMQTAYELKTRRSA-- 87

  Fly    66 KGSVDEGTPDFNYDTGIEELDKLLDSVEQPFKPGRVWELCGQPGVGKTQ------LLYTLALNFV 124
                 ..:|.| ..|.:..||:.|..   ....|.:.|:.|.||.||||      :|.||..:..
Mouse    88 -----HLSPAF-LSTTLCALDEALHG---GVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLG 143

  Fly   125 WKHSQAVLFIDTKREFSCKRIQDMLRAREVD----EEASERAMKGIRVVQAATGADINDLLKSFD 185
            .... ||::|||:..|:.:|:.::..:|...    ||........:.:.:..|...:...|:|.:
Mouse   144 GLEG-AVVYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLE 207

  Fly   186 HQLTAETHASMQTKLVLIDSLAACFAFYRGRRMRDVRKSVLTELACKIR---KLALRGVA---FV 244
            .::     .|...|||::||:|:.           |||....:|...|:   |...:|.:   ::
Mouse   208 EEI-----ISKGVKLVIVDSIASV-----------VRKEFDPKLQGNIKERNKFLGKGASLLKYL 256

  Fly   245 IGNVSFFENNKDSCGDDGEQ--------NGDDEEVTRQQLEPMLGSYWSSVATLRLSVELPEEED 301
            .|..|.          .||:        :|....:|.|             .|..||..||.:.|
Mouse   257 AGEFSI----------PGERKMPATSASSGGKVILTNQ-------------ITTHLSGALPSQAD 298

  Fly   302 FTLQDDGLR----------FIYVISNTYGPDGEHCL 327
            .....|.|.          .:..:.||:|    ||:
Mouse   299 LVSPADDLSLSEGTSGSSCLVAALGNTWG----HCV 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad51D	NP_610466.2	P-loop_NTPase	80..336	CDD:304359	63/282 (22%)
		radB	80..335	CDD:236482	63/282 (22%)
Rad51b	XP_030102481.1	Rad51_DMC1_radA	94..369	CDD:238543	63/284 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810