DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and slc22a18

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001032462.1 Gene:slc22a18 / 559752 ZFINID:ZDB-GENE-051120-165 Length:400 Species:Danio rerio


Alignment Length:552 Identity:100/552 - (18%)
Similarity:185/552 - (33%) Gaps:197/552 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RNQVIYQTCTVIFHYNESDCKQLDVKNASAEIN--AIETELQPYVANL---------FLARTLLE 100
            :.:|||.|..:                |:.||.  .::..:.||:|..         :|..|:  
Zfish     6 KQKVIYITYLI----------------AALEITWMFLQFSITPYLARRLGFDTIWFGYLQTTV-- 52

  Fly   101 SIVPAFCGLFIGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELSSYYVV------NPWWYIMAA 159
            .::....|...|.::|.:|.:..|.||              |..|.:|.:      :|:...:..
Zfish    53 GVIQLLGGPIYGRFADIFGARAALSVS--------------CGASVFYFLPLTVADSPFMLFVHK 103

  Fly   160 VP----HSLLGGNCVFSVAAFCFISDITDCKSRPYRMIFMESLFFIGLTSGSLLSSFVYAAVGS- 219
            :|    |:|.|...|        ::|:::.:.|...:..:...|.||:.:||.|...:....|. 
Zfish   104 LPAVFMHALPGAQMV--------VADLSEKEKRAEALGKLGLCFGIGMIAGSSLGGTLSTRFGER 160

  Fly   220 -AATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVPITACDLQLDRVA 283
             ||:.|..|..|:.  :.::.|:|        ::||                             
Zfish   161 FAASFGAVGSFVSL--MLVLNFIP--------KQTK----------------------------- 186

  Fly   284 IDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQEAEEQAKKAGLF 348
                                  |..||                          |::|:.....:|
Zfish   187 ----------------------TQTTP--------------------------ESDEKGSSKSVF 203

  Fly   349 SMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLFVREKFHWTVRDYT-FFE 412
            :|..|..::......:....:.|..|.|           |:..||:..:...|.....:.. :..
Zfish   204 NMGEITRLMKFPGVAKTFTVKIISGLPT-----------GIFQVMFSIIAMNFFQLKAEQNGYLM 257

  Fly   413 TVSHLVPMI--GALIGFLIL----RKVFRLSVVTLALLAFFSEILNNLAK-GFATMPWHMYLSVT 470
            ....:|.|:  ||:||.|..    ..:..|||...:|:.....::.|:.: .|..:|    :..:
Zfish   258 AYFGIVQMVIQGAVIGRLTSSFSENSLLLLSVGVSSLVGLAQALMTNVFQFCFIVIP----MMFS 318

  Fly   471 LGVFRSISGPMCRTIVSNIVPPSD----LGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGL 531
            |.||..|:..|    ::..|.|:|    ||...|::::|::..|.:...||        .||.  
Zfish   319 LSVFNVITDSM----LTKSVSPADTGTMLGLCASVQSLLRTVGPTIGGFLY--------ETYG-- 369

  Fly   532 FNFVSSFLYL---LSFVFIGYVLRIKYRYKQH 560
               |.||.|:   ::....|.:|....|.:.|
Zfish   370 ---VPSFGYIQCVINAAVFGLLLTTGGRSQTH 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 84/472 (18%)
MFS_1 101..>261 CDD:284993 34/171 (20%)
MFS_1 375..>558 CDD:284993 43/197 (22%)
slc22a18NP_001032462.1 MFS 10..389 CDD:119392 96/537 (18%)
MFS_1 10..358 CDD:284993 86/493 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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