DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and slc46a3

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_009303566.1 Gene:slc46a3 / 556282 ZFINID:ZDB-GENE-100105-2 Length:475 Species:Danio rerio


Alignment Length:554 Identity:99/554 - (17%)
Similarity:197/554 - (35%) Gaps:141/554 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FRMFYIEPVVFMLLFSH---TLSGTIQRNQVIYQTCT-----VIFHYNESDCKQLDVKNASAEIN 79
            |.||...|::...::..   .|||.|..::.: ..|:     :..|                  .
Zfish    16 FAMFMFYPLLQQYVYRRLWFELSGFIYTSESL-SHCSSNHSYITLH------------------Q 61

  Fly    80 AIETELQPYVANLFLARTLLESIVPA-FCGLFIGSWSDHYGRKPLLIVSMIG---FSASFLMMAA 140
            |::.|     .:|||..:.|..::|: ...|.:.|:||:.|||..::..::|   .:.|:::::.
Zfish    62 AVQKE-----TSLFLLHSELCFLIPSLISALLLVSYSDYCGRKVAIVPPLVGEALHALSYVLVSR 121

  Fly   141 ICELSSYYVVNPWWYIMAAVPHSLLGGNCVFSVAAFCFISDITDCKSRPYRMIFMESL-FFIGLT 204
            .....:|.:.:.:...:...|.:|:||       .|.:::|:........:.:.|..| ..:|:.
Zfish   122 FSFSLNYLLASSFMSGLMGGPPTLIGG-------CFAYVADLCGEDLEGQKTVRMARLDMILGVL 179

  Fly   205 SG--SLLSSFVYAAVGSAATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECID 267
            :|  ||.:.|...|.|.......:..:.....|:::..:.|||                      
Zfish   180 TGLASLCTGFFIKAAGFTWPFLTAVFLHLINLLYVLVVLKESL---------------------- 222

  Fly   268 SKVPITACDLQLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAE- 331
                                               .||..|....|             |..:| 
Zfish   223 -----------------------------------VLPNSAVSTSS-------------PSASEA 239

  Fly   332 ERKRQEAEEQAKKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSI-FVFDGVMTVMYL 395
            .|.||......:..|::       ::.....||    |.::.|:.||.|... ....|..::..|
Zfish   240 PRLRQTQALTTRLQGVY-------LLFAASNRR----RNVVLLLMLAAFAFFKLALQGGWSIFIL 293

  Fly   396 F-VREKFHWT---VRDYTFFETVSHLVPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAK 456
            : :.....|:   |...:...|..:||...|..:....|...:      :.||...|.....:..
Zfish   294 YELNTPLCWSEVFVGYGSALSTAIYLVSFAGVALLSRCLPDAY------IILLGLMSVAAGLIMA 352

  Fly   457 GFATMPWHMYLSVTLGVFRSI-SGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLI 520
            .||.....|:| |.|.:..|| ..|:.|:::|.||..|:.|.:|:....::..:..|:..::..|
Zfish   353 AFAKTTLLMFL-VRLPLLLSIMPTPVLRSMMSKIVSGSEQGAMFACVAFVEMLSVGVSFTVFNSI 416

  Fly   521 YKRSLTTYPGLFNFVSSFLYLLSFVFIGYVLRIK 554
            |..:|:.:.|....:::.|.::....|..:|.::
Zfish   417 YAATLSWFSGFSFLLAAGLTVIPSALICVILCLR 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 81/459 (18%)
MFS_1 101..>261 CDD:284993 30/166 (18%)
MFS_1 375..>558 CDD:284993 39/186 (21%)
slc46a3XP_009303566.1 MFS_1 77..409 CDD:284993 75/426 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48502
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23507
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X552
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.930

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