DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and CG5078

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster


Alignment Length:502 Identity:99/502 - (19%)
Similarity:172/502 - (34%) Gaps:167/502 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PYVANL--------FLARTL---LESIVPAFCGLFIGSWSDHYGRKPLLIVSMIGFSASFLMMAA 140
            |.:|.|        ||...|   ::.|:.......||:.||.||||.||::::|..|....||  
  Fly    44 PMIATLKETFPDHTFLMNGLVMGVKGILSFLSSPLIGALSDIYGRKVLLLITVIFTSLPIPMM-- 106

  Fly   141 ICELSSYYVVNPWWYIMAAVPHSLLGGNCVFSVAAFCFISDIT--DCKSRPYRMIFMESLFFIGL 203
                    .::.||:.:.:....:||.:  ||| ||.:::|:|  :.:||.|.::  .:.|...|
  Fly   107 --------TMDNWWFFVISSISGVLGVS--FSV-AFAYVADVTTKEERSRSYELV--SATFAASL 158

  Fly   204 TSGSLLSSFVYAAVGSAATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDS 268
            .....:.:.:....|....:.::..:.|...:|::..|||:|.       :|..:..:..:..| 
  Fly   159 VIAPAMGNLIMDRYGINTVVLVATLVSTTNVMFVLLAVPETLQ-------QNVRSTGLSWKQAD- 215

  Fly   269 KVPITACDLQLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLL--AKYVERLPQKAE 331
              |.    |.|.||..|  ||.:                          ||  ..:...||:   
  Fly   216 --PF----LSLRRVGSD--PNVL--------------------------LLCVVMFTFLLPE--- 243

  Fly   332 ERKRQEAEEQAKKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLF 396
                         ||.:|.|.....::..|...:        |.||..|::|.   |:       
  Fly   244 -------------AGEYSSVPAYLKLTMGFDFTE--------LSTLVAFMAIL---GI------- 277

  Fly   397 VREKFHWTVRDYTFFETVSHLVPMIGA----LIGFLILRKVFRLSVVTLALLAFFSEILNNLAKG 457
                        :...|:..:|..:||    ::|.|       |.::.|.|.|...|        
  Fly   278 ------------SINVTLGSIVKTLGAKNAIILGLL-------LELLQLILFAIGYE-------- 315

  Fly   458 FATMPWHMYLSVTLGVFRSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYK 522
                .|.|:|:..:....||:.|.....||........|.:..:...:......:...|:.:::.
  Fly   316 ----KWQMWLAGNVAALSSITFPAVSAYVSLYTDVETQGAVQGMITGMSGLCSGLGPALFGIVFY 376

  Fly   523 RS------------------LTTYPGLFNFVSSFLYLLSFVFIGYVL 551
            .|                  ..|.|.:...:|        ||||.:|
  Fly   377 LSDMDLDKNRILIGSVSGDRTVTNPFMIGAIS--------VFIGILL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 89/471 (19%)
MFS_1 101..>261 CDD:284993 39/161 (24%)
MFS_1 375..>558 CDD:284993 35/199 (18%)
CG5078NP_649238.3 MFS 27..375 CDD:119392 90/452 (20%)
MFS_1 27..368 CDD:284993 89/445 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2816
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.