DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and slc46a1

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_956579.1 Gene:slc46a1 / 393255 ZFINID:ZDB-GENE-040426-1012 Length:481 Species:Danio rerio


Alignment Length:539 Identity:101/539 - (18%)
Similarity:188/539 - (34%) Gaps:141/539 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IEPVVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYN---ESDCKQLDVKNASAEINAIETELQPYV 89
            :|||:|:..||..|...: ..|.::...:....||   ...|      |||...:.::||::...
Zfish    45 VEPVMFLSTFSIVLQAPL-CTQYLWDRLSEDVGYNGTKTGGC------NASTVHDPLQTEVETLT 102

  Fly    90 ANLFLARTLLESIVPAFCGLFIGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELSSYYVVNPWW 154
            |:..|...|...:|..|..:.:|||||..||:.:||:..:|.:    :.||:.....|..:..:|
Zfish   103 AHWSLYINLGGFLVGLFMVILLGSWSDRAGRRLVLIIPSLGLA----VQAAVYLTVMYLKLPVFW 163

  Fly   155 YIMAAVPHSLLGGNCVFSVAAFCFISDITDCKSRPYRMIFMESLFFIGLTSGSLLSSFVYAAVGS 219
            :::..:...|.|.........|.:::|.::..||.:|:..:|:.  :||..       ::|::..
Zfish   164 FLIGRICSGLSGDFNAILAGCFAYVADTSERGSRTFRVAILEAC--LGLAG-------MFASIIG 219

  Fly   220 AATIGISGCIVTF---------ATLFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVPITAC 275
            .......|.|..|         |.|:...||||:            :|.:.:.....::.....|
Zfish   220 GQWRRAQGYINPFWLVLATNLTAALYAYLFVPET------------VTPDPQARLFSTRHHQAVC 272

  Fly   276 DLQLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQEAEE 340
            .|            :.:|..||:                                          
Zfish   273 RL------------YSSDAPPGR------------------------------------------ 283

  Fly   341 QAKKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLF-VREKFHWT 404
                                        |:.:||..|..||.:.|..|...:..|: :.....|.
Zfish   284 ----------------------------RSKLWLYILCFFLVVTVHLGCSDLYVLYELSAPLCWG 320

  Fly   405 VRDYTFFETVSHLVPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPWHMYLSV 469
            .....:.....||. .:.:|.|...::.....|.|  ||:...|.::..:....|.....|:...
Zfish   321 PELIGYGSAAKHLA-YLTSLTGLRAMQCCLEDSWV--ALVGLTSNMVGLVVISVADTTALMFTGY 382

  Fly   470 TLGVFRSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGLFNF 534
            .|......|.|:.|:.:|.:|.|::.|.:|:....::.....|::.::..:       ||...:|
Zfish   383 GLCFLFMASTPVLRSKLSKLVDPAEQGALFASVACVEGLCSLVSSGVFNAL-------YPATLHF 440

  Fly   535 VSSFLYLLSFVFIGYVLRI 553
            :..|    .|||...:|.|
Zfish   441 MKGF----PFVFGAAILLI 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 79/455 (17%)
MFS_1 101..>261 CDD:284993 37/168 (22%)
MFS_1 375..>558 CDD:284993 37/180 (21%)
slc46a1NP_956579.1 MFS 93..460 CDD:119392 87/484 (18%)
MFS_1 114..427 CDD:284993 73/422 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48502
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23507
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X552
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.930

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