DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and Mfsd8

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001380725.1 Gene:Mfsd8 / 361939 RGDID:1310132 Length:519 Species:Rattus norvegicus


Alignment Length:640 Identity:105/640 - (16%)
Similarity:198/640 - (30%) Gaps:251/640 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QWEKVFRMFYIEPVVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYNESDCKQLDVKNASAEINAIE 82
            :|:.| |:.|:...:..:.||..:.......|.|.||....|                       
  Rat    36 RWKSV-RILYLTMFLSSVGFSIVIMSIWPYLQKIDQTADASF----------------------- 76

  Fly    83 TELQPYVANLFLARTLLESIVPAFCGLFIGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELSSY 147
              |...:|:..|.:.:..   |.|     |.||::..||..||||:      |:.:||.| |.:|
  Rat    77 --LGWVIASYSLGQMVAS---PLF-----GLWSNYRPRKEPLIVSI------FISVAANC-LYAY 124

  Fly   148 YVV----NPWWYIMAAVPHSLLG---GNCVFSVAAF-CFISDITDCKSRPYRMIFMESLFFIGLT 204
            ..|    |.::.::|   ..|:|   ||    ||.. .:|:..|..:.|...|....:...:|..
  Rat   125 VHVPAAHNKYYMLIA---RGLVGFGAGN----VAVVRSYIAGATSLQERTGAMANTSTCQALGFI 182

  Fly   205 SGSLLSSFVYAAVGS---------------------AATIGISGCIVTFATLFIIFFVPESLHFH 248
            .|.:..: .:|.:|.                     |:.:||...|:      |:|.:.|    |
  Rat   183 LGPVFQT-CFALIGEKGVAWDIIKLQINMYTAPVLLASFLGILNIIL------ILFILRE----H 236

  Fly   249 KEQETKNAITANVEKECIDSKVP-ITACDLQLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAM 312
            :..:        :.::|....|| ..|.:||:...:||                 ::...||   
  Rat   237 RVDD--------LGRQCKSVNVPEENADELQIPEGSID-----------------QVAVVAT--- 273

  Fly   313 SFDDDLLAKYVERLPQKAEERKRQEAEEQAKKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTL 377
                                                                           .:
  Rat   274 ---------------------------------------------------------------NI 275

  Fly   378 AMFLSIFVFDGVMTVMYLFVREKFHWTVRDYTFFETVSHLVPMIGALIGF----LILRKVFRLSV 438
            ..|:.:|:|....|::.....:.:.||......:..:..:...:.|::.|    |:.:|:...::
  Rat   276 VFFVVLFIFAVYETILTPLTMDMYAWTQEQAVLYNGIILVAFGVEAVLVFMGVKLLSKKIGERAI 340

  Fly   439 VT----------LALLAF---------------------FSEIL----NNLAKGFATMP------ 462
            :.          ..||.:                     |.||:    |:..:..:..|      
  Rat   341 LLGGFVVVWVGFFILLPWGNQFPKIQWEDLHNSSTPNTTFGEIIIDLWNSPREDHSEQPTGCPIE 405

  Fly   463 --WHMYLSV-------TLGVFRSISGPMCR----TIVSNIVPPSD----LGKIFSIKNVLQSFAP 510
              |.:|..|       |..|...|..|.|.    |:.|.::.|..    :|.:.:..:..:...|
  Rat   406 QAWCLYTPVIHLAQFLTAAVLVGIGYPACSVMSYTLYSKVLGPKPQGIYMGWLTTSGSAARILGP 470

  Fly   511 FVAAPLYTLIYKR-SLTTYPGLFNFVSSFLYLLSFVFIGYVLRIKYRYKQHYAKV 564
            ...:.:||.:..| :::...|:..|        :.:.||.|.:....:...|.::
  Rat   471 VFISHVYTYLGPRWAVSLVCGIVAF--------TILLIGAVYKRLVAFSVRYGRI 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 87/538 (16%)
MFS_1 101..>261 CDD:284993 42/188 (22%)
MFS_1 375..>558 CDD:284993 38/245 (16%)
Mfsd8NP_001380725.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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