DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and CG15890

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001285245.1 Gene:CG15890 / 32401 FlyBaseID:FBgn0030576 Length:599 Species:Drosophila melanogaster


Alignment Length:552 Identity:130/552 - (23%)
Similarity:226/552 - (40%) Gaps:100/552 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WEKVFRM----FYIEPVVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYNESDCKQLDVKNASAEIN 79
            |.:..|:    ..:||::...:....||....:|..:.:.|.|...|.:..|..| .:..:|...
  Fly    59 WREKIRLVANNVTVEPILAAYIMPSVLSNLATQNLNLEKACRVNMAYGDEVCDAL-TRRQTANYT 122

  Fly    80 AIETELQPYVANLFLARTLLESIVPAFCGLFIGSWSD-HYGRKPLLIVSMIGFSASFLMMAAICE 143
            ..|..:|..||.:...:|:::|:.|....||.||||| |..|||.:::.::|   .||.:..:. 
  Fly   123 LEEETVQQMVARMAAWKTVIQSLFPCLLILFWGSWSDRHRRRKPCILIPVVG---EFLGVVGLM- 183

  Fly   144 LSSYYVVNPW--WYIMAAVPHSLLGGNCVFSVAAFCFISDITDCKSRPYRMIFMESLFFIGLTSG 206
            |..|:...|.  ..:..|:..||.||.....:..|.:|:|||..:.|..|:..:...|.:|:..|
  Fly   184 LCVYFEQAPMEAAALTEAIFPSLSGGWFTMLMGVFSYIADITTEEDRTLRIGILNVCFSVGVPIG 248

  Fly   207 SLLSSFVYAAVGSAATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVP 271
            ...|..:...:|......||......|.::..||:                              
  Fly   249 MAFSGVLLKQIGFYGVFSISAAFYVIAFVYGFFFL------------------------------ 283

  Fly   272 ITACDLQLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQ 336
                                  |||                                  :.|..:
  Fly   284 ----------------------EEP----------------------------------QSRPEK 292

  Fly   337 EAEEQAKKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLFVREKF 401
            .||:::..|..|...|:.......||:.::..|..:.|:.:.:.:.|....|.|.|.|||.|.:|
  Fly   293 SAEQKSLLADFFDKEHVVQTFRVAFKKGENQRRKRVILLMIVVMVIIGPLHGEMAVTYLFTRFRF 357

  Fly   402 HWTVRDYTFFETVSHLVPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPWHMY 466
            :|:..:::||.|.:....:||.:....||.....:....:.:|:..|:||::....|||:|||||
  Fly   358 NWSEVEFSFFSTYAMFTGLIGVIFCVGILSHKLNIDDALVGVLSSTSKILSSFVYAFATLPWHMY 422

  Fly   467 LSVTLGVFRSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGL 531
            |...:.:|...:....|:|.:.:|...:|||:.|:..|.::..|.|.||:||.:|..:|...||.
  Fly   423 LGGLVEIFNGTAFIAMRSIATKLVSKDELGKVNSLFGVAEALMPMVFAPMYTTLYAATLRVLPGA 487

  Fly   532 FNFVSSFLYLLS-FVFIGYVLRIKYRYKQHYA 562
            |..:...|.|.| |:|: ::.|.:.|.:::.|
  Fly   488 FFLLGGGLTLFSVFIFL-WMYRFQVRQRRNLA 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 108/449 (24%)
MFS_1 101..>261 CDD:284993 41/162 (25%)
MFS_1 375..>558 CDD:284993 57/183 (31%)
CG15890NP_001285245.1 MFS 135..507 CDD:119392 110/462 (24%)
MFS_1 135..470 CDD:284993 96/424 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458951
Domainoid 1 1.000 97 1.000 Domainoid score I7096
eggNOG 1 0.900 - - E1_KOG2816
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I3339
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 1 1.000 - - FOG0001349
OrthoInspector 1 1.000 - - mtm8701
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23507
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X552
109.900

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