DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8008 and Slc46a1

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001013991.1 Gene:Slc46a1 / 303333 RGDID:1309472 Length:459 Species:Rattus norvegicus


Alignment Length:537 Identity:111/537 - (20%)
Similarity:206/537 - (38%) Gaps:135/537 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IEPVVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYNESDCKQLDVKNASAE--INAIETELQPYVA 90
            :||:||:..|:..|.|.: ..|.|:...:....||.:..:: :..|.||:  :..:||....:  
  Rat    25 VEPLVFLANFALVLQGPL-TTQYIWHRISTELGYNGTRHRE-NCGNQSADPVLKEVETLTSHW-- 85

  Fly    91 NLFLARTLLESIVPAFCGLF----IGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELSSYYVV- 150
                  ||..::.....|||    :|:|||..||:|||:::.:|     |::.|:.   |.:|| 
  Rat    86 ------TLYMNVGGFLVGLFWSTLLGAWSDRVGRRPLLVLASLG-----LLLQAVV---SIFVVQ 136

  Fly   151 ---NPWWYIMAAVPHSLLGGNCVFSVAAFCFISDITDCKSRPYRMIFMESLFFIGLTSGSLLSSF 212
               :..::::.....:|||.......|:|..::|::...||.:||..:|:...:..|..|||...
  Rat   137 LQLHIGFFVLGRALCALLGDFNGLLAASFASVADVSSNHSRTFRMALLEACIGVAGTLASLLGGH 201

  Fly   213 VYAAVGSAATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVPITACDL 277
            ...|.|.|....::..::...||:..|...|::                                
  Rat   202 WLRAQGYANPFWLALAVLIVMTLYAAFCFGETV-------------------------------- 234

  Fly   278 QLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQEAEEQA 342
                            :||                                              
  Rat   235 ----------------KEP---------------------------------------------- 237

  Fly   343 KKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLF-VREKFHWTVR 406
            |...||::.|.|.::..........:|..:.|.:||:|:.:.|..|...::.|: :.....|..:
  Rat   238 KSTRLFTLRHHRSIVQLYVVPAPEKSRMHLALYSLAIFVVVTVHFGAQDILTLYELSTPLCWDSK 302

  Fly   407 DYTFFETVSHLVPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPWHMYLSVTL 471
            ...:.....|| |.:.:|:|..:|:  |.|:...:|.:.....||..:...|||:...|:....|
  Rat   303 LIGYGSAAQHL-PYLTSLLGLRLLQ--FCLADTWVAEIGLAFNILGMVVFAFATITPLMFTGYGL 364

  Fly   472 GVFRSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGLFNFVS 536
            .....::.|:.|..:|.:|..|:.|.:||....:.|.|..:|:.::.       :.||...||:.
  Rat   365 LFLSLVTTPVIRAKLSKLVSESEQGALFSAVACVNSLAMLMASGIFN-------SLYPATLNFMK 422

  Fly   537 SFLYLL--SFVFIGYVL 551
            .|.:||  ..:||..:|
  Rat   423 GFPFLLGAGLLFIPAIL 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 90/456 (20%)
MFS_1 101..>261 CDD:284993 40/167 (24%)
MFS_1 375..>558 CDD:284993 44/180 (24%)
Slc46a1NP_001013991.1 MFS 22..444 CDD:421695 111/537 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I6433
eggNOG 1 0.900 - - E1_KOG2816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 126 1.000 Inparanoid score I4593
OMA 1 1.010 - - QHG48502
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44504
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23507
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X552
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

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