DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and Slc46a3

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001020139.1 Gene:Slc46a3 / 288454 RGDID:1307594 Length:461 Species:Rattus norvegicus


Alignment Length:534 Identity:105/534 - (19%)
Similarity:203/534 - (38%) Gaps:127/534 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RMFYIEPVVFMLLFSHTLSGTIQRNQVIYQ-------TCTVIFHYNESDCKQLDVKNASAEINAI 81
            ::.:|||.:.:..|:.||:..:.. |.:|:       ..|.....|.|:|:|    |.|:...|.
  Rat     2 KISFIEPAILLYAFAMTLTIPLTA-QYVYRRIWEETGNYTFTSSSNVSECEQ----NKSSSTFAF 61

  Fly    82 ETELQPYVANLFLARTLLESIVPAFCGLF-IGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELS 145
            :.|:|. .|:||..:..:..::|.....| :.|.||::|||..:::|.:|...:.|.:.|:    
  Rat    62 QEEVQK-KASLFSLQVEISGLIPGLVSTFMLLSSSDNHGRKLPMVLSSLGSLGTNLWLCAM---- 121

  Fly   146 SYYVVNPWWYIMAAVPHSLLGGNCVFSVAAFCFISD-ITDCKSRPYRMIFMESLFFIGLTSG--S 207
            ||:.:.....:.:....:|.|....|..|.|.:|.| ..:.|.|..|:..::  |.:|:.:|  .
  Rat   122 SYFDLPLQLLVASTFIGALFGNYTTFWGACFAYIVDQEKEYKHRIIRIAVLD--FMLGVVTGLTG 184

  Fly   208 LLSSFVYAAVGSAATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVPI 272
            |.|.:....:|.|.:..|...:|.....:|:||:.:                           ||
  Rat   185 LSSGYFIRELGFAWSYFIIAVVVLVNLAYILFFLSD---------------------------PI 222

  Fly   273 TACDLQLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQE 337
            .....|:  |.:.|       .|..||                                      
  Rat   223 KESSSQI--VTMSC-------SESLKD-------------------------------------- 240

  Fly   338 AEEQAKKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLF-VREKF 401
                     ||...::      .||......|:::.|:...:.:..||..|:..|..|: :....
  Rat   241 ---------LFYRTYM------LFKNGSCKRRSLLCLLIFTLVVYFFVVFGITPVFTLYELGPPL 290

  Fly   402 HWTVRDYTFFETVSHLVPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPWHMY 466
            .|. ..|..:.:....:..:.:.:|..:..  :.|..:.:|.:..|:.::..:...|......|:
  Rat   291 CWN-EVYIGYGSALGSLSFLSSFLGIWLFS--YCLKDIHIAYVGIFTTMVGMMLTAFTRTTLMMF 352

  Fly   467 LSVTLGVFRSISGPM--CRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYP 529
            | |.:..|.:|. |:  .|:::|.:|..::.|.:|:....|::.....:...|..||..::..||
  Rat   353 L-VRISFFFTIM-PLSILRSMLSKVVHSTEQGVLFACIAFLETLGGVTSTSAYNGIYSATVAWYP 415

  Fly   530 GLFNFVSSFLYLLS 543
            |       |::|||
  Rat   416 G-------FVFLLS 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 84/450 (19%)
MFS_1 101..>261 CDD:284993 36/163 (22%)
MFS_1 375..>558 CDD:284993 34/172 (20%)
Slc46a3NP_001020139.1 MFS 3..437 CDD:421695 105/533 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 126 1.000 Inparanoid score I4593
OMA 1 1.010 - - QHG48502
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44504
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23507
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X552
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.980

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