DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and slc-46A

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_500781.2 Gene:slc-46A / 189356 WormBaseID:WBGene00021159 Length:469 Species:Caenorhabditis elegans


Alignment Length:547 Identity:109/547 - (19%)
Similarity:199/547 - (36%) Gaps:124/547 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KVFRMFYIEPVVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYNESDCKQLDVKNASAEINAIETEL 85
            :..||..:|..:|:.:....|:..:.:|.:..:.|.:.:..||:.|:.:.......:|.|.....
 Worm     3 RYLRMLGMEIPLFLYMLGSYLNYPVFQNLIYEKECLIKYQQNETFCRNVSAYYDDKDIQAAANHF 67

  Fly    86 QPYVANLFLARTLLESIVPAFCGLFIGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELSSYYVV 150
            . ::::|.|   |..|:|..   |.:|:.:|::..|..||:..||           |.|.:...|
 Worm    68 Y-FISSLTL---LCPSLVTT---LLLGAATDYWSIKIPLIIPYIG-----------CILGTINYV 114

  Fly   151 NPWWYIMAAVPHSLLGGNCVFSVAAFC--FISDITD----------CKSRPYRMIFMESLFFIGL 203
            ...::|..:| :.||..:.:|.:   |  ||:.|:.          .:.|.||:..:|....:|.
 Worm   115 FQSYFIHTSV-YFLLISDALFGL---CGGFIAIISTTLTYGVKTSMLRYRSYRIAGVEGAIGLGG 175

  Fly   204 TSGSLLSSFVYAAVGSAATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDS 268
            |.|..||..:..|.|.|.|..|...:...|.|:::....|:                        
 Worm   176 TVGFALSGTIREACGYAVTFLIILGLQLLALLYLLGLAKET------------------------ 216

  Fly   269 KVPITACDLQLDRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEER 333
                                                                        |.|..
 Worm   217 ------------------------------------------------------------KFEPV 221

  Fly   334 KRQEAEEQAKKAGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLFVR 398
            :..|........|...:..||:......|.|..  |.::.|..||..|.:.||.|:..:.|.::|
 Worm   222 RPDEHTSLISTTGKQLVAVIREFYRVITKSRQF--RLLLILNLLAFGLEMLVFSGLSDIQYSYLR 284

  Fly   399 EKFHWTVRDYTFFETVSHLVPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPW 463
            .|..|..:.|.:|..:|:.:.....|..:.:||... :|...||.|..|.::::.....|.....
 Worm   285 YKLQWGDKKYGWFSGLSYGITTAAVLFLYPLLRMKL-MSDGMLATLGLFFKMISLFMFAFLQNEV 348

  Fly   464 HMYLSVTLGVFRSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTY 528
            ..|....:.:|........|..:|:::...:.|||||:.::|:.....||..:|..:|..:||.:
 Worm   349 MAYSIAVIVMFNRFVSTGFRAFISSLIDMQEQGKIFSVISLLEGITTLVATSIYNNVYPNTLTFF 413

  Fly   529 PGLFNFVSSFLYLLSFVFIG---YVLR 552
            |||...:|:...|:....:.   :|:|
 Worm   414 PGLLYLISAVTLLIPLAIVSTSDFVVR 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 92/457 (20%)
MFS_1 101..>261 CDD:284993 39/171 (23%)
MFS_1 375..>558 CDD:284993 45/181 (25%)
slc-46ANP_500781.2 MFS_SLC46 7..436 CDD:340944 106/537 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I3339
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48502
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23507
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.980

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