DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and slc46a1

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001120610.1 Gene:slc46a1 / 100145771 XenbaseID:XB-GENE-961470 Length:462 Species:Xenopus tropicalis


Alignment Length:526 Identity:93/526 - (17%)
Similarity:188/526 - (35%) Gaps:121/526 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IEPVVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYNES---DCKQLDVKNASAEINAIETELQPYV 89
            :|||:|:.:|:..|.|.: ..|.::...:....:|.:   ||    ..|.|....|::.|::...
 Frog    26 VEPVLFLSMFALALQGPL-TTQYLWDRLSADIGFNGTRILDC----TVNGSKSTGALQQEVETLT 85

  Fly    90 ANLFLARTLLESIVPAFCGLFIGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELSSYYVVNPWW 154
            ::..|...|...:|..|..:.:|.|||..||:|:|....||.:    :.||:..:..|..::..:
 Frog    86 SHWSLYINLGGFLVGLFSVMLLGPWSDKVGRRPVLFFPCIGLA----LQAALYLVVMYQELHVAY 146

  Fly   155 YIMAAVPHSLLGGNCVFSVAAFCFISDITDCKSRPYRMIFMESLFFIGLTSGSLLSSFVYAAVGS 219
            :::......:.|...:.....|.:|:|::|.:||.:|:..:|:...|.....|::......|.|.
 Frog   147 FLIGRFISGISGDFNMILAGCFAYIADVSDRQSRTFRVAILEACLGIAGMVASIIGGHWRKAQGY 211

  Fly   220 AATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVPITACDLQLDRVAI 284
            .....:...:..|..:::.|.|.||:                                       
 Frog   212 INPFWLVFAVNLFTAVYVYFCVEESV--------------------------------------- 237

  Fly   285 DCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQEAEEQAKKAGLFS 349
                         |||                                          |.|.||:
 Frog   238 -------------KDK------------------------------------------KPARLFT 247

  Fly   350 MVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLF-VREKFHWTVRDYTFFET 413
            ..|.:..........:::.|..:.|.:||:.:.:.|..|...:..|: :.....|......:...
 Frog   248 HRHYQTFFRLFTVSGENNRRRKLCLYSLALLVVVTVHMGAKNLFVLYELSYPLCWDSDLIGYGSA 312

  Fly   414 VSHLVPMIGALIGFLILRKVFRLSVVT--LALLAFFSEILNNLAKGFATMPWHMYLSVTLGVFRS 476
            ..||. .:.:|.|.    ::|:|.:..  :|.:.|.|.|...:....|:....|:....|..|..
 Frog   313 AEHLT-YLSSLAGL----RLFQLCLADSWVAEMGFISNISGLVVISLASTTPVMFTGYGLRFFAM 372

  Fly   477 ISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGLFNFVSSFLYL 541
            .:.|:.|:.:|.:|...:.|.:||....::..:..:|..::.       :.||...:|:..|.:|
 Frog   373 ATTPVIRSKLSKMVEEGEQGALFSSVACVEGLSYLLATAVFN-------SLYPATLHFMQGFPFL 430

  Fly   542 LSFVFI 547
            ...:.:
 Frog   431 FGALLL 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 76/448 (17%)
MFS_1 101..>261 CDD:284993 33/159 (21%)
MFS_1 375..>558 CDD:284993 33/176 (19%)
slc46a1NP_001120610.1 MFS 79..446 CDD:119392 79/468 (17%)
MFS_1 97..410 CDD:284993 70/415 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7096
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I4704
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X552
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

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