DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and mfsd10

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_004911324.2 Gene:mfsd10 / 100145046 XenbaseID:XB-GENE-958779 Length:454 Species:Xenopus tropicalis


Alignment Length:555 Identity:108/555 - (19%)
Similarity:199/555 - (35%) Gaps:153/555 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYNESDCKQLDVKNASAE--INAIET-ELQPYVANL 92
            |||:.|....|..|:    ::....:::.|:::||.........|.:  .:||.. :.:.|.:.|
 Frog    23 VVFVTLLIDLLGFTL----ILPLLPSILEHFSKSDDSLYQTIQHSVDWFASAIGVPQERKYNSVL 83

  Fly    93 F--LARTLLESIVPAFCGLFIGSWSDHYGRKPLLIVSMIGFSASFLMMAAICELSSYYVVNPWWY 155
            |  ...|:. |::...|....|:.||:.||:..::::.:|...|:.:.|    :|..:.:    :
 Frog    84 FGGFIGTIF-SLLQFICSPLTGAASDYLGRRRAMMITAVGLIFSYTLWA----ISRSFGI----F 139

  Fly   156 IMAAVPHSLLGGNCVFSVAAFCFISDITDCKSRPYRMIFMESLFFIGLTSGSLLSSFVYAAVGSA 220
            |::.|...|..||.....|   .|:|:...|:|...|..:...|.:|.|.|.::.::......|.
 Frog   140 ILSRVVGGLSKGNVSLCTA---IIADLPLLKNRSTGMAMIGVAFSLGFTIGPMIGAYFAMNAASE 201

  Fly   221 ATIGISGCIVT--FAT---LFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVPITACDLQLD 280
            ....:...::.  ||.   :||..|:||:|  .||.... ::||..:          .|.||   
 Frog   202 EIFYVRPALLALFFAVADLIFIFLFLPETL--PKENRVP-SVTAGFK----------GASDL--- 250

  Fly   281 RVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQEAEEQAKKA 345
                                       .:|...|....:.:           ||...:.|..:|.
 Frog   251 ---------------------------LSPVALFHFSAITR-----------RKGSPSPENVEKL 277

  Fly   346 GLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFDGVMTVMYLFVREKFHWT--VRDY 408
            .|..||:                           ||.:|:|.|:...:.....::|.:.  .:..
 Frog   278 RLLGMVY---------------------------FLYLFLFSGLEYTLSFLTHQRFQFNSMQQGK 315

  Fly   409 TFFETVSHLVPMIGALIGFL------ILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPWHMYL 467
            .||        .||..:..:      .:|....:..|..|::.        |...|..:.|...|
 Frog   316 MFF--------FIGLTMAVIQGGYARRIRPGNEIKAVKRAIIL--------LIPAFLLIGWATNL 364

  Fly   468 SVTLGV-------FRSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFA----PFVAAPLYTLIY 521
            .| ||.       ..:|..|...::||.....|..|.:..|...|.:.|    |.::|.||.|..
 Frog   365 LV-LGAGLLLYSFAAAIVVPCLSSLVSTYGSASQKGTVMGILRSLGALARALGPILSASLYWLAG 428

  Fly   522 KRSLTTYPGLFNFVSSFLYLLSFVFIGYVLRIKYR 556
            .:...:       :|:||:|:..:::|   |:|.:
 Frog   429 AQICFS-------LSAFLFLVPLLYLG---RLKQK 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 89/469 (19%)
MFS_1 101..>261 CDD:284993 39/164 (24%)
MFS_1 375..>558 CDD:284993 41/201 (20%)
mfsd10XP_004911324.2 MFS_MFSD10 21..451 CDD:340947 107/551 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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