DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8008 and LOC100002406

DIOPT Version :9

Sequence 1:NP_001137623.1 Gene:CG8008 / 35935 FlyBaseID:FBgn0033387 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_017213485.1 Gene:LOC100002406 / 100002406 -ID:- Length:424 Species:Danio rerio


Alignment Length:541 Identity:106/541 - (19%)
Similarity:193/541 - (35%) Gaps:156/541 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YIEPVVFMLLFSHTLSGTIQRNQVIYQTCTVIFHYNESDCKQLDVKNASAEINAIETELQPYVAN 91
            ||.|:||....:.:...|..: .|:.:.|.   :..:||.:|..:.|.:...|.| .:..|::..
Zfish     7 YIAPLVFSAQVASSFFDTALQ-MVVKERCA---NATDSDGQQKAITNFNMTYNMI-AKFMPFLPA 66

  Fly    92 LFLARTLLESIVPAFCGLFIGSWSDHYGRKPLLIVSMIGF--SASFLMMAAICELSSYYVVNPW- 153
            :.||:.                 .|...||..::|.::|:  |...|::.         |...| 
Zfish    67 ILLAKV-----------------GDRGYRKVPIVVPLVGYFLSRGLLLLD---------VAFDWP 105

  Fly   154 WYIMAAVP--HSLLGGNCVFSVAAFCFISDITDCKSRPYRMIFMESLFFIGLTSGSLLSSFVYA- 215
            ..::.|||  |.|.||...:.......:|..:..:.|...::..|.::.|....|||.|..::| 
Zfish   106 LQVLYAVPVIHGLCGGFASYWAGVMALVSVSSGEEERSVSIMMTELVYGIAGFIGSLASGHLFAL 170

  Fly   216 -AVGSAATIGISGCIVTFATLFIIFFVPESLHFHKEQETKNAITANVEKECIDSKVPITACDLQL 279
             .|.....:.:||..|....|.:::                                 .|..|::
Zfish   171 YTVNLKQGVILSGSSVVLYLLCLLY---------------------------------AATFLRV 202

  Fly   280 DRVAIDCPPNFMNDEEPGKDKRMELPTPATPAMSFDDDLLAKYVERLPQKAEERKRQEAEEQAKK 344
            .      ||..:.|       |:|                               |:|:      
Zfish   203 G------PPAVLGD-------RLE-------------------------------RRES------ 217

  Fly   345 AGLFSMVHIRDMISTCFKRRDHHARAIIWLVTLAMFLSIFVFD----GVMTVMYLFV-REKFHWT 404
               |.::             :|.||..|.:..|  |:|..::|    |.|.::..:| :|..:|.
Zfish   218 ---FGII-------------NHEARDKINIALL--FVSGILYDIAVAGGMEMLAAYVLKEPLNWG 264

  Fly   405 VRDYTFFETVSHLVPMIGALIGFLILRKVFRL-----SVVTLALLAFFSEILNNLAKGFATMPWH 464
            .....:......|:    .:..||.::...||     |::.:.:::|.:.|   ....|.|....
Zfish   265 ATLVGYGNAAGSLL----FITSFLGVKMFTRLSLRDESMIMVGMVSFATGI---YFMAFVTTTPM 322

  Fly   465 MYLSVTLGVFRSISGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYP 529
            .:|:.::.:|..|..|..|:::|..|..:..|..|.:..:....|.....|:||.||:.:|.|:|
Zfish   323 YFLARSVTLFALIPMPTIRSLLSKQVKGTSYGITFVMLQLSFKLASLATTPIYTKIYQATLDTFP 387

  Fly   530 GLFNFVSSFLYLLSFVFIGYV 550
            |....:||...:||.|.|..|
Zfish   388 GFVFILSSIFTVLSIVPISIV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8008NP_001137623.1 MFS 101..547 CDD:119392 87/462 (19%)
MFS_1 101..>261 CDD:284993 30/166 (18%)
MFS_1 375..>558 CDD:284993 45/186 (24%)
LOC100002406XP_017213485.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23507
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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