DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp38 and AT2G40650

DIOPT Version :10

Sequence 1:NP_610463.2 Gene:Prp38 / 35934 FlyBaseID:FBgn0050342 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_565937.1 Gene:AT2G40650 / 818660 AraportID:AT2G40650 Length:355 Species:Arabidopsis thaliana


Alignment Length:330 Identity:177/330 - (53%)
Similarity:229/330 - (69%) Gaps:25/330 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGVYGGNI 65
            |||||...|||:.|||||.|:|||:|::||...:||||||.||||.||||||||..:||.:||:.
plant     1 MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGTFGGSR 65

  Fly    66 KPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYLEPLYIDNRKL 130
            |||.||||.||||||||||:||||||||:::||||.||||||||||..:|.|:||||||.|.||:
plant    66 KPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYLEPLYNDYRKV 130

  Fly   131 RRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPKVSVLDEDLDDELPSD 195
            |::...|:|.:.::||.|:|||..|..|||.:||::||..||:|..:||:.|||::|.::|    
plant   131 RQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPRKSVLEDDFEEE---- 191

  Fly   196 EEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSARSRDYYDELEDYDRQRNRVRN 260
            |||  |.|....:.:.....:|.:|..|.|.|:|:||.   :|.|.||     .||||..:..|:
plant   192 EEK--EENEGIADGSEDEMDQRRKSPERERERDRDRRR---DSHRHRD-----RDYDRDYDMDRD 246

  Fly   261 RDTHNEDYDRRQNNGRHDRERERQDRDSIRERERDGDRDRRDRERERERDRGRHDQRERDSRGER 325
               |:.||:|.:.:|| ||:||| |||..|||:||.:|. |||||:| |||.|...|.|    .|
plant   247 ---HDRDYERERGHGR-DRDRER-DRDHYRERDRDRERG-RDRERDR-RDRARRRSRSR----SR 300

  Fly   326 DRRRY 330
            ||:|:
plant   301 DRKRH 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp38NP_610463.2 PRP38 10..172 CDD:460901 103/161 (64%)
PRK12678 <193..>330 CDD:237171 57/136 (42%)
AT2G40650NP_565937.1 PRP38 10..172 CDD:460901 103/161 (64%)

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