DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp38 and AT2G40650

DIOPT Version :9

Sequence 1:NP_610463.2 Gene:Prp38 / 35934 FlyBaseID:FBgn0050342 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_565937.1 Gene:AT2G40650 / 818660 AraportID:AT2G40650 Length:355 Species:Arabidopsis thaliana


Alignment Length:330 Identity:177/330 - (53%)
Similarity:229/330 - (69%) Gaps:25/330 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGVYGGNI 65
            |||||...|||:.|||||.|:|||:|::||...:||||||.||||.||||||||..:||.:||:.
plant     1 MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGTFGGSR 65

  Fly    66 KPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYLEPLYIDNRKL 130
            |||.||||.||||||||||:||||||||:::||||.||||||||||..:|.|:||||||.|.||:
plant    66 KPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYLEPLYNDYRKV 130

  Fly   131 RRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPKVSVLDEDLDDELPSD 195
            |::...|:|.:.::||.|:|||..|..|||.:||::||..||:|..:||:.|||::|.::|    
plant   131 RQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPRKSVLEDDFEEE---- 191

  Fly   196 EEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSARSRDYYDELEDYDRQRNRVRN 260
            |||  |.|....:.:.....:|.:|..|.|.|:|:||.   :|.|.||     .||||..:..|:
plant   192 EEK--EENEGIADGSEDEMDQRRKSPERERERDRDRRR---DSHRHRD-----RDYDRDYDMDRD 246

  Fly   261 RDTHNEDYDRRQNNGRHDRERERQDRDSIRERERDGDRDRRDRERERERDRGRHDQRERDSRGER 325
               |:.||:|.:.:|| ||:||| |||..|||:||.:|. |||||:| |||.|...|.|    .|
plant   247 ---HDRDYERERGHGR-DRDRER-DRDHYRERDRDRERG-RDRERDR-RDRARRRSRSR----SR 300

  Fly   326 DRRRY 330
            ||:|:
plant   301 DRKRH 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp38NP_610463.2 PRP38 10..172 CDD:281379 103/161 (64%)
AT2G40650NP_565937.1 PRP38 10..172 CDD:397446 103/161 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 226 1.000 Domainoid score I679
eggNOG 1 0.900 - - E1_KOG2889
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 316 1.000 Inparanoid score I722
OMA 1 1.010 - - QHG54794
OrthoDB 1 1.010 - - D1182767at2759
OrthoFinder 1 1.000 - - FOG0005867
OrthoInspector 1 1.000 - - oto3803
orthoMCL 1 0.900 - - OOG6_102388
Panther 1 1.100 - - LDO PTHR23142
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4261
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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