DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp38 and prpf38a

DIOPT Version :9

Sequence 1:NP_610463.2 Gene:Prp38 / 35934 FlyBaseID:FBgn0050342 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001003483.1 Gene:prpf38a / 445089 ZFINID:ZDB-GENE-040801-225 Length:313 Species:Danio rerio


Alignment Length:344 Identity:181/344 - (52%)
Similarity:228/344 - (66%) Gaps:52/344 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGVYGGNI 65
            |||||||:|.:|||||||||:|||||:|||:||||||:||.|||||:|||||||:|||||||||:
Zfish     1 MANRTVKDANSVHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGVYGGNV 65

  Fly    66 KPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYLEPLYIDNRKL 130
            |||.|||||||||||||||||:|||||||:|||||.|||.|:||||.::||||||||||.|.||:
Zfish    66 KPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYLEPLYNDYRKI 130

  Fly   131 RRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPKVSVLDEDLDDELPSD 195
            :.|||.|:||::::||:|||||..:|:|||||||:|||.:|||...::|::|.|:||| ||:.:.
Zfish   131 KSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDPRISALEEDL-DEVETS 194

  Fly   196 EEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSARSRDYYDELEDYDRQRNRVRN 260
            ||:.||..:|:                |.:|.|..|||              ..|.||.|.....
Zfish   195 EEEDDEDEKPE----------------RMQSPEPHRRS--------------YRDMDRPRRSPSP 229

  Fly   261 RDTHNEDYDRRQNNGRHDRERERQDRDSIRERERDGDRD---RRDRERERER------------D 310
            |      |.|.::..|..|..:|:.....|||:||..|.   ||.|.|.|||            .
Zfish   230 R------YRRSRSPRRRSRSPKRRSPSPRRERDRDRHRSKSPRRHRSRSRERRHRSKSPGHHRSH 288

  Fly   311 RGRHDQRERDSRGERDRRR 329
            |.|...:..:||.::..:|
Zfish   289 RHRSHSKSPESRSKKSHKR 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp38NP_610463.2 PRP38 10..172 CDD:281379 123/161 (76%)
prpf38aNP_001003483.1 N-terminal protein interaction domain. /evidence=ECO:0000250|UniProtKB:Q8NAV1 1..179 134/177 (76%)
PRP38 11..172 CDD:281379 123/160 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..313 46/163 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577553
Domainoid 1 1.000 276 1.000 Domainoid score I1704
eggNOG 1 0.900 - - E1_KOG2889
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 338 1.000 Inparanoid score I2343
OMA 1 1.010 - - QHG54794
OrthoDB 1 1.010 - - D1182767at2759
OrthoFinder 1 1.000 - - FOG0005867
OrthoInspector 1 1.000 - - oto40495
orthoMCL 1 0.900 - - OOG6_102388
Panther 1 1.100 - - LDO PTHR23142
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R993
SonicParanoid 1 1.000 - - X4261
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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