DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp38 and prp38

DIOPT Version :9

Sequence 1:NP_610463.2 Gene:Prp38 / 35934 FlyBaseID:FBgn0050342 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_595693.1 Gene:prp38 / 2540453 PomBaseID:SPBC19C2.08 Length:210 Species:Schizosaccharomyces pombe


Alignment Length:208 Identity:94/208 - (45%)
Similarity:134/208 - (64%) Gaps:12/208 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGVYGGNIKPTQFLC 72
            :.:..|...|.:||.||:|.||.||.|||||||.|.|..|||:|:.|.::||.| ||.:||:|:|
pombe    12 QGEAAHEMLPTFLIGKILRERIVDSIYWKEQCFGLNACSLVDRAVRLEYIGGQY-GNQRPTEFIC 75

  Fly    73 LTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYLEPLYIDNRKLR-RQNRA 136
            |..|:|||.|||:|:.:::...||||:|||.|||:|||...::.::.||||..|.|||| |.|  
pombe    76 LLYKLLQIAPEKEIIQQYLSIPEFKYLRALAAFYVRLTWDDVEVHQTLEPLLRDYRKLRIRTN-- 138

  Fly   137 GQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPKVSVLDEDLDDELPSDEEKADE 201
            .:..:.|:||.:|:||..:.||||.||.::.|..||:.:.:||..|..||:.|||        ::
pombe   139 SEIRLTYLDEVVDDLLNAEVVCDISLPPLRSRLQLEDLDLLEPLSSSSDEEDDDE--------EQ 195

  Fly   202 TNRPKENSTAVRR 214
            .::.:.|..||.|
pombe   196 ISKLESNEGAVDR 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp38NP_610463.2 PRP38 10..172 CDD:281379 80/162 (49%)
prp38NP_595693.1 PRP38 21..170 CDD:281379 78/151 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1029
eggNOG 1 0.900 - - E1_KOG2889
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1187
OMA 1 1.010 - - QHG54794
OrthoFinder 1 1.000 - - FOG0005867
OrthoInspector 1 1.000 - - oto101023
orthoMCL 1 0.900 - - OOG6_102388
Panther 1 1.100 - - LDO PTHR23142
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R993
SonicParanoid 1 1.000 - - X4261
TreeFam 1 0.960 - -
1312.860

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