DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shrb and SNF7

DIOPT Version :9

Sequence 1:NP_610462.3 Gene:shrb / 35933 FlyBaseID:FBgn0086656 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_013125.1 Gene:SNF7 / 850712 SGDID:S000004015 Length:240 Species:Saccharomyces cerevisiae


Alignment Length:235 Identity:86/235 - (36%)
Similarity:136/235 - (57%) Gaps:19/235 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FGKMFG-----GKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASK-NKRVAL 62
            :..:||     .|.:.:||  :||.:|||..|:|.|||..|..:|.::.|.||...:| ||.:|.
Yeast     2 WSSLFGWTSSNAKNKESPT--KAIVRLREHINLLSKKQSHLRTQITNQENEARIFLTKGNKVMAK 64

  Fly    63 QALKKKKRLEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDM 127
            .||||||.:|:.|.:::||:.::|.|..::||||.|...:..|:..|.|:|..|..:|:|||.:.
Yeast    65 NALKKKKTIEQLLSKVEGTMESMEQQLFSIESANLNLETMRAMQEGAKAMKTIHSGLDIDKVDET 129

  Fly   128 MDDIAEQQDVAREISDAISNPVAFGA-DLDDEDLERELDELEQENFDKE---IIG-------IPE 181
            ||:|.||.::..|||||||.|:..|| ::|:::|:.|||.|.|||.::|   |:.       |.|
Yeast   130 MDEIREQVELGDEISDAISRPLITGANEVDEDELDEELDMLAQENANQETSKIVNNNVNAAPISE 194

  Fly   182 PTPTLPEAPTEDLPEKAKEKKKATTTTAVEDDDDPDMKQL 221
            ...:||..|:..:.:.....|........||:|:..:::|
Yeast   195 NKVSLPSVPSNKIKQSENSVKDGEEEEDEEDEDEKALREL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shrbNP_610462.3 Snf7 20..193 CDD:281366 76/184 (41%)
SNF7NP_013125.1 Snf7 21..206 CDD:397437 76/184 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 127 1.000 Domainoid score I1173
eggNOG 1 0.900 - - E1_KOG1656
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H57102
Inparanoid 1 1.050 137 1.000 Inparanoid score I1201
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53573
OrthoFinder 1 1.000 - - FOG0001179
OrthoInspector 1 1.000 - - oto100335
orthoMCL 1 0.900 - - OOG6_100985
Panther 1 1.100 - - LDO PTHR22761
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1365
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.