DRSC/TRiP Functional Genomics Resources

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Protein Alignment shrb and SNF7.1

DIOPT Version :9

Sequence 1:NP_610462.3 Gene:shrb / 35933 FlyBaseID:FBgn0086656 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001078468.1 Gene:SNF7.1 / 829037 AraportID:AT4G29160 Length:219 Species:Arabidopsis thaliana


Alignment Length:210 Identity:64/210 - (30%)
Similarity:113/210 - (53%) Gaps:5/210 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARK-NASKNKRVALQALKKKK 69
            ::||..|:.|... :.:.||.||..||.||::.|..|...|:..|:: :.:||||.|:|.||:|:
plant     4 RLFGKPKQEANAL-QTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQCLKRKR 67

  Fly    70 RLEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDMMDDIAEQ 134
            ..|.|::|:......|..|...||.|...|..:..:::.|.|:|...:..::|.|...||:|.||
plant    68 LYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQ 132

  Fly   135 QDVAREISDAISNPVAFGADLDDEDLERELDELEQENFDKEIIGIPEPTPTLPEAPTEDLPEKAK 199
            .:..::|.:|::.|:...||.|:::|..||||||.|..:.:::   :|..|.|..|:..:|...:
plant   133 TENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLL---QPATTAPPLPSVPVPAGRQ 194

  Fly   200 EKKKATTTTAVEDDD 214
            ..:........|:::
plant   195 PARPVPQKRTAEEEE 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shrbNP_610462.3 Snf7 20..193 CDD:281366 58/173 (34%)
SNF7.1NP_001078468.1 Snf7 17..160 CDD:281366 47/142 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1656
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H57102
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53573
OrthoDB 1 1.010 - - D1490465at2759
OrthoFinder 1 1.000 - - FOG0001179
OrthoInspector 1 1.000 - - otm3468
orthoMCL 1 0.900 - - OOG6_100985
Panther 1 1.100 - - O PTHR22761
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.790

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