DRSC/TRiP Functional Genomics Resources

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Protein Alignment shrb and SNF7.2

DIOPT Version :9

Sequence 1:NP_610462.3 Gene:shrb / 35933 FlyBaseID:FBgn0086656 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_179573.1 Gene:SNF7.2 / 816502 AraportID:AT2G19830 Length:213 Species:Arabidopsis thaliana


Alignment Length:213 Identity:72/213 - (33%)
Similarity:117/213 - (54%) Gaps:13/213 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARK-NASKNKRVALQALK 66
            |..::||..|:...|. :.:.||.||..||.||:..|..|...|:..|:: :.:||||.|:|.||
plant     2 FMNRLFGKPKQETSTL-QTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAAIQCLK 65

  Fly    67 KKKRLEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDMMDDI 131
            :|:..|:|::|:......|..|...||.|...|..:..::..|.|:|...:..::|.|...||:|
plant    66 RKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEI 130

  Fly   132 AEQQDVAREISDAISNPVAFGA-DLDDEDLERELDELEQENFDKEIIGIPEPTPTLPEAPTEDLP 195
            .||.:..::|.:|:|.|  ||| |.|:::||.||||||....:::::   :|.|.  ..|..:.|
plant   131 NEQTENMKQIQEALSAP--FGANDFDEDELEAELDELEGAELEEQLL---QPVPI--HVPQGNKP 188

  Fly   196 EKAKEKKKATTTTAVEDD 213
            .:|..:|:   .||.||:
plant   189 ARAPAQKQ---PTAEEDE 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shrbNP_610462.3 Snf7 20..193 CDD:281366 60/174 (34%)
SNF7.2NP_179573.1 Snf7 18..>152 CDD:397437 47/135 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1656
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H57102
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53573
OrthoDB 1 1.010 - - D1490465at2759
OrthoFinder 1 1.000 - - FOG0001179
OrthoInspector 1 1.000 - - otm3468
orthoMCL 1 0.900 - - OOG6_100985
Panther 1 1.100 - - LDO PTHR22761
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.790

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