Protein Alignment shrb and Chmp4bl1

DIOPT Version :10

• Sequence 1: NP_610462.3
• Gene: shrb / 35933
• FlyBaseID: FBgn0086656
• Length: 226
• Species: Drosophila melanogaster
• Sequence 2: NP_001263385.1
• Gene: Chmp4bl1 / 679886
• RGDID: 1583604
• Length: 224
• Species: Rattus norvegicus
• Alignment Length: 233
• Identity: 134/233 - (57%)
• Similarity: 164/233 - (70%)
• Gaps: 20/233 - (8%)

  Fly     1 MSFFGKMFG------GKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR 59
            ||.|||:||      ||.:  ||..||||:||:||.||.|||||||.|||.||..|:|:.:||||
  Rat     1 MSVFGKLFGAGWGKAGKGD--PTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKR 63

  Fly    60 VALQALKKKKRLEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKV 124
            .||||||:|||.||||.||||||||||.||||||:|||||.||..|..||.|:|.||.|||:|||
  Rat    64 AALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKV 128

  Fly   125 HDMMDDIAEQQDVAREISDAISNPVAFGADLDDEDLERELDELEQENFDKEIIGI--PEPTPTLP 187
            .::|.|||:||::|.:.|.|||.||.||.:.|.::|..||:|||||..||.::.|  ||..| ||
  Rat   129 DELMQDIADQQELAEQTSTAISKPVGFGEEFDKDELMAELEELEQEELDKNLLEISGPETVP-LP 192

  Fly   188 EAPTEDLPEKAKEKKKATTTTAVEDDDDPDMKQLLSWS 225
            ..|:..||.|..:||        |::|| |||:|.:|:
  Rat   193 NVPSVALPSKPAKKK--------EEEDD-DMKELENWA 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shrb	NP_610462.3	Snf7	20..193	CDD:460896	110/174 (63%)
Chmp4bl1	NP_001263385.1	Snf7	24..198	CDD:460896	110/174 (63%)