Protein Alignment shrb and chmp4c

DIOPT Version :10

• Sequence 1: NP_610462.3
• Gene: shrb / 35933
• FlyBaseID: FBgn0086656
• Length: 226
• Species: Drosophila melanogaster
• Sequence 2: NP_001017844.1
• Gene: chmp4c / 550542
• ZFINID: ZDB-GENE-050417-389
• Length: 239
• Species: Danio rerio
• Alignment Length: 211
• Identity: 116/211 - (54%)
• Similarity: 150/211 - (71%)
• Gaps: 9/211 - (4%)

  Fly    16 PTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKRVALQALKKKKRLEKQLQQIDG 80
            |:..|||.:|||||.||.||||:||::||.|:.||:||.:||||.||||||:|||.|:||.||||
Zfish    38 PSPQEAINRLRETEAMLTKKQEYLESRIEQEIVIAKKNGTKNKRAALQALKRKKRFEQQLTQIDG 102

  Fly    81 TLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDMMDDIAEQQDVAREISDAI 145
            ||||||.|||:||:|.|||.||..|..||.|:|..|:.:|:||:..:|.||.|||:||:||||||
Zfish   103 TLSTIEFQRESLENATTNTEVLKNMGYAAKAIKGVHEKIDLDKIDSLMQDITEQQEVAQEISDAI 167

  Fly   146 SNPVAFGADLDDEDLERELDELEQENFDKEIIGIPEPTPTLPEAPTEDLPEKAKEKKKATTTTAV 210
            |.|  ||...|:::|..||.|||||:.::.:    :....||.|||..|| ..:...:||:...|
Zfish   168 SKP--FGDQFDEDELLAELAELEQEDLEESM----KSMGRLPSAPTHKLP-STRPSHRATSKKRV 225

  Fly   211 EDDDDPDMKQLLSWSN 226
            |||.  |||:|.||::
Zfish   226 EDDH--DMKRLASWAS 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shrb	NP_610462.3	Snf7	20..193	CDD:460896	101/172 (59%)
chmp4c	NP_001017844.1	Snf7	42..>173	CDD:460896	86/132 (65%)