Protein Alignment shrb and Vps20

DIOPT Version :10

• Sequence 1: NP_610462.3
• Gene: shrb / 35933
• FlyBaseID: FBgn0086656
• Length: 226
• Species: Drosophila melanogaster
• Sequence 2: NP_611686.2
• Gene: Vps20 / 37581
• FlyBaseID: FBgn0034744
• Length: 212
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 68/224 - (30%)
• Similarity: 112/224 - (50%)
• Gaps: 31/224 - (13%)

  Fly     5 GKMFG-GKKEVAPT----TGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR-VALQ 63
            |.:|| ..|:.||:    ..:|:.:|::..:.|.:.|:.:|.::|::..:|||...:.:: .|..
  Fly     2 GALFGKTSKKTAPSRITDQDKAVLQLKQQRDRLKQYQKRIETQLENDRLLARKCLQQGRKDRAKL 66

  Fly    64 ALKKKKRLEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDMM 128
            .|:|||..|..|...|..|..:|.....:|.|.....||..:|....|||:.|:.:|:|:|..:|
  Fly    67 LLRKKKYQESLLTNADKQLENLEKLAADIEFAQVEMKVLDGLKAGNAALKKVHEMLDIDEVERIM 131

  Fly   129 DD----IAEQQDVAREISDAISNPVAFGADLDDEDLERELDELEQENFDKEIIGIPEPTPTLPEA 189
            |:    |.:||::...::|.::..       |:||:..|||.||.|...::       ...||:.
  Fly   132 DETREGIEKQQEIDAILTDVLTTQ-------DEEDVLAELDALEAEEEQQK-------GAQLPDV 182

  Fly   190 PTEDLP-----EKAKE--KKKATTTTAVE 211
            ||||||     |..:|  |.|||....||
  Fly   183 PTEDLPIPAEIESVEEPAKTKATKKVLVE 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shrb	NP_610462.3	Snf7	20..193	CDD:460896	50/177 (28%)
Vps20	NP_611686.2	Snf7	22..186	CDD:460896	50/177 (28%)